forked from FarmMaps/FarmMapsApiClient
Projects FarmmapsBulkSatDownload and FarmmapsDataDownload fully updated and tested
Added some extra Tasks to /FarmmapsApi/Services/GeneralService.cs Added class SatelliteStatistics.cs to /FarmmapsApi/Models
This commit is contained in:
@@ -6,6 +6,7 @@ using System.Threading.Tasks;
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using FarmmapsApi.Models;
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using Google.Apis.Upload;
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using Microsoft.Extensions.Logging;
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using Newtonsoft.Json;
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using Newtonsoft.Json.Linq;
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using static FarmmapsApi.Extensions;
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using static FarmmapsApiSamples.Constants;
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@@ -348,12 +349,10 @@ namespace FarmmapsApi.Services
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}
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public async Task<Item> FindSatelliteItem(Item cropfieldItem, string satelliteTaskCode, string FieldName = null, int selectedLayer = 0, bool allItemsStatistics = false, string DownloadFolder = null) {
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public async Task<Item> FindSatelliteItem(Item cropfieldItem, string satelliteTaskCode) {
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var taskStatus = await _farmmapsApiService.GetTaskStatusAsync(cropfieldItem.Code, satelliteTaskCode);
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// find ndvi or wdvi satellite data geotiffs
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var temporalItem = await FindChildItemAsync(cropfieldItem.Code, TEMPORAL_ITEMTYPE,
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"Cropfield Satellite items", item => item.SourceTask == SATELLITE_TASK &&
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taskStatus.Finished >= item.Created &&
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@@ -367,101 +366,149 @@ namespace FarmmapsApi.Services
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var satelliteTiffs = await _farmmapsApiService.GetItemChildrenAsync(temporalItem.Code);
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if (allItemsStatistics == false) {
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_logger.LogInformation("Available satellite images:");
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var count = 0;
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TimeSpan.FromSeconds(0.5);
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foreach (var item in satelliteTiffs) {
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_logger.LogInformation("Available satellite images:");
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var count = 0;
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TimeSpan.FromSeconds(0.5);
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foreach (var item in satelliteTiffs) {
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Console.WriteLine($"Satellite image #{count}: {item.DataDate}");
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count++;
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}
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_logger.LogInformation("Enter satellite image number for NBS application");
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int element = Int32.Parse(Console.ReadLine());
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var selectedSatelliteItem = satelliteTiffs[element];
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if (selectedSatelliteItem == null) {
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_logger.LogError("Satellite item not found");
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return selectedSatelliteItem;
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}
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Console.WriteLine($"Satellite image #{count}: {item.DataDate}");
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count++;
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}
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if (allItemsStatistics == true ) {
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var count = 0;
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foreach (var item in satelliteTiffs) {
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var satellitetBand = item.Data["layers"][selectedLayer]["name"];
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var SatelliteImageYear = (DateTime)item.DataDate;
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var SatelliteYear = SatelliteImageYear.ToString("yyyy");
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var SatelliteFile = $"{DownloadFolder}/SatelliteDataStatistics_{SatelliteYear}_{FieldName}_{satellitetBand}.csv";
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var NewLineField = $"Field,Date,Mean,Min,Max,Standard deviation, ConfidenceInterval low, ConfidenceInterval high" + Environment.NewLine;
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if (count == 0) {
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File.AppendAllText(SatelliteFile, NewLineField);
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var numbervandersat = satelliteTiffs.Count;
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Console.WriteLine($"{numbervandersat} Satellite images found");
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}
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_logger.LogInformation("Enter satellite image number for NBS application");
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int element = Int32.Parse(Console.ReadLine());
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var selectedSatelliteItem = satelliteTiffs[element];
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var SatelliteStatistics = item.Data["layers"][0]["renderer"]["band"]["statistics"];
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var SatelliteImageDate = (DateTime)item.DataDate;
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var satelliteDate = SatelliteImageDate.ToString("yyyy-MM-dd");
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var NewLineDate = $"\"date\":{satelliteDate}" + Environment.NewLine;
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if (SatelliteStatistics == null) {
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Console.WriteLine($"{satelliteDate} no statistics found");
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//Console.WriteLine($"Available data: {item.Data}");
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} else {
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File.AppendAllText(SatelliteFile, $"{FieldName},{satelliteDate},{SatelliteStatistics["mean"]},{SatelliteStatistics["min"]},{SatelliteStatistics["max"]},{SatelliteStatistics["stddev"]},{SatelliteStatistics["confidenceIntervalLow"]},{SatelliteStatistics["confidenceIntervalHigh"]}" + Environment.NewLine);
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}
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if (true) {
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// download the geotiff of needed inputtype
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var selectedSatelliteItemDate = (DateTime)item.DataDate;
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var SatelliteDate = selectedSatelliteItemDate.ToString("yyyyMMdd");
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_logger.LogInformation("Downloading geotiff file");
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await _farmmapsApiService.DownloadItemAsync(item.Code,
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Path.Combine(DownloadFolder, $"satelliteGeotiff_{FieldName}_{satellitetBand}_{SatelliteDate}.zip"));
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}
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count++;
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}
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}
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var selectedSatelliteItemTemp = satelliteTiffs[0];
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if (selectedSatelliteItemTemp == null) {
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if (selectedSatelliteItem == null)
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{
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_logger.LogError("Satellite item not found");
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return selectedSatelliteItemTemp;
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}
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return selectedSatelliteItemTemp;
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return selectedSatelliteItem;
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}
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public async Task<List<Item>> FindSatelliteItemsAll(Item cropfieldItem, string satelliteTaskCode)
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public async Task<List<Item>> FindSatelliteItems(Item cropfieldItem, string satelliteTaskCode)
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{
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var taskStatus = await _farmmapsApiService.GetTaskStatusAsync(cropfieldItem.Code, satelliteTaskCode);
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// find ndvi or wdvi satellite data geotiffs
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var temporalItem = await FindChildItemAsync(cropfieldItem.Code, TEMPORAL_ITEMTYPE,
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"Cropfield Satellite items", item => item.SourceTask == SATELLITE_TASK &&
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taskStatus.Finished >= item.Created &&
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taskStatus.Finished <= item.Created.Value.AddHours(1));
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if (temporalItem == null)
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if (taskStatus.State == ItemTaskState.Error)
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{
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_logger.LogError("Temporal item not found");
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_logger.LogWarning(taskStatus.Message);
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return null;
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}
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else
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{
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// find satellite data geotiffs
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var temporalItem = await FindChildItemAsync(cropfieldItem.Code, TEMPORAL_ITEMTYPE,
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"Cropfield Satellite items", item => item.SourceTask == SATELLITE_TASK &&
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taskStatus.Finished >= item.Created &&
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taskStatus.Finished <= item.Created.Value.AddHours(1));
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if (temporalItem == null)
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{
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_logger.LogWarning("Temporal item not found");
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return null;
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}
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else
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{
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var satelliteTiffs = await _farmmapsApiService.GetItemChildrenAsync(temporalItem.Code);
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return satelliteTiffs;
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}
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}
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var satelliteTiffs = await _farmmapsApiService.GetItemChildrenAsync(temporalItem.Code);
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return satelliteTiffs;
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}
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public async Task<string> DownloadSatelliteStats(List<Item> satelliteTiffs, string fieldName = null, List<string> satelliteBands = null, string downloadFolder = null)
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{
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string satelliteDataStatisticsFile = Path.Combine(downloadFolder, $"satelliteStats_{fieldName}.csv");
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File.Delete(satelliteDataStatisticsFile); // Delete the SatelliteFile file if exists
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List<int> selectedLayers = new List<int>();
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foreach (string satelliteBand in satelliteBands)
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{
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if (satelliteBand == "ndvi") selectedLayers.Add(0);
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if (satelliteBand == "wdvi") selectedLayers.Add(1);
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};
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string headerLineStats = $"FieldName,satelliteDate,satelliteBand,max,min,mean,mode,median,stddev,minPlus,curtosis,maxMinus,skewness,variance,populationCount,variationCoefficient,confidenceIntervalLow, confidenceIntervalHigh,confidenceIntervalErrorMargin" + Environment.NewLine;
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File.AppendAllText(satelliteDataStatisticsFile, headerLineStats);
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foreach (var item in satelliteTiffs)
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foreach (int selectedLayer in selectedLayers)
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{
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{
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var satelliteBand = item.Data["layers"][selectedLayer]["name"];
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var satelliteImageDate = (DateTime)item.DataDate;
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var satelliteStatisticsJtoken = item.Data["layers"][selectedLayer]["renderer"]["band"]["statistics"];
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if (satelliteStatisticsJtoken == null)
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{
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_logger.LogWarning($"{satelliteImageDate.ToString("yyyy-MM-dd")} no statistics found");
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//Console.WriteLine($"Available data: {item.Data}");
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}
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else
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{
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SatelliteStatistics satelliteStatistics = satelliteStatisticsJtoken.ToObject<SatelliteStatistics>();
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satelliteStatistics.fieldName = fieldName;
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satelliteStatistics.satelliteDate = satelliteImageDate;
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satelliteStatistics.satelliteBand = satelliteBand.ToString();
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File.AppendAllText(satelliteDataStatisticsFile, $"" +
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$"{satelliteStatistics.fieldName}," +
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$"{satelliteStatistics.satelliteDate.ToString("yyyy-MM-dd")}," +
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$"{satelliteStatistics.satelliteBand}," +
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$"{satelliteStatistics.max}," +
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$"{satelliteStatistics.min}," +
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$"{satelliteStatistics.mean}," +
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$"{satelliteStatistics.mode}," +
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$"{satelliteStatistics.median}," +
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$"{satelliteStatistics.stddev}," +
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$"{satelliteStatistics.minPlus}," +
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$"{satelliteStatistics.curtosis}," +
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$"{satelliteStatistics.maxMinus}," +
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$"{satelliteStatistics.skewness}," +
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$"{satelliteStatistics.variance}," +
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$"{satelliteStatistics.populationCount}," +
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$"{satelliteStatistics.variationCoefficient}," +
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$"{satelliteStatistics.confidenceIntervalLow}," +
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$"{satelliteStatistics.confidenceIntervalHigh}," +
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$"{satelliteStatistics.confidenceIntervalErrorMargin}" +
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Environment.NewLine);
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}
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}
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}
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return satelliteDataStatisticsFile;
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}
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public async Task<List<SatelliteStatistics>> ListSatelliteStatistics(Item satelliteTiff, List<string> satelliteBands = null, string fieldName = null)
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{
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SatelliteStatistics satelliteStatistics;
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List<SatelliteStatistics> listSatelliteStatistics = new List<SatelliteStatistics>();
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List<int> selectedLayers = new List<int>();
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foreach (string satelliteBand in satelliteBands)
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{
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if (satelliteBand == "ndvi") selectedLayers.Add(0);
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if (satelliteBand == "wdvi") selectedLayers.Add(1);
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};
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foreach (int selectedLayer in selectedLayers)
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{
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var satelliteBand = satelliteTiff.Data["layers"][selectedLayer]["name"];
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var satelliteImageDate = (DateTime)satelliteTiff.DataDate;
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var satelliteStatisticsJtoken = satelliteTiff.Data["layers"][selectedLayer]["renderer"]["band"]["statistics"];
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if (satelliteStatisticsJtoken == null)
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{
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_logger.LogWarning($"{satelliteImageDate.ToString("yyyy-MM-dd")} no statistics found");
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//Console.WriteLine($"Available data: {item.Data}");
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}
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else
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{
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satelliteStatistics = satelliteStatisticsJtoken.ToObject<SatelliteStatistics>();
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satelliteStatistics.fieldName = fieldName.ToString();
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satelliteStatistics.satelliteDate = satelliteImageDate;
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satelliteStatistics.satelliteBand = satelliteBand.ToString();
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listSatelliteStatistics.Add(satelliteStatistics);
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}
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}
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return listSatelliteStatistics;
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}
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//VanDerSat
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public async Task<string> RunVanDerSatTask(Item cropfieldItem) {
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_logger.LogInformation("Gathering VanDerSat information for cropfield, this might take a while!");
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