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This commit is contained in:
Sijbrandij 2021-03-01 15:56:15 +01:00
commit 6d14299852
23 changed files with 1066 additions and 181 deletions
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45
FarmmapsApi/Services/GeneralService.cs
View File

@ -75,6 +75,10 @@ namespace FarmmapsApi.Services
public async Task<Item> GeotiffToShape(Item tiffItem) {
var taskmapRequest = new TaskRequest { TaskType = TASKMAP_TASK };
taskmapRequest.attributes["cellWidth"] = "3";
taskmapRequest.attributes["cellHeight"] = "1";
taskmapRequest.attributes["angle"] = "0";
string itemTaskCode = await _farmmapsApiService.QueueTaskAsync(tiffItem.Code, taskmapRequest);
await PollTask(TimeSpan.FromSeconds(5), async (tokenSource) => {
@ -102,6 +106,47 @@ namespace FarmmapsApi.Services
return taskMapItem;
}
// Create taskmap based on width, height and direction
public async Task<Item> CreateTaskmap(Item cropfieldItem, Item tiffItem, string cellWidth, string cellHeight, string startPoint, string endPoint = null, string angle = null)
{
var taskmapRequest = new TaskRequest { TaskType = TASKMAP_TASK };
taskmapRequest.attributes["inputCode"] = tiffItem.Code;
taskmapRequest.attributes["operation"] = "shape"; // Currently onlye "shape" supported, if ISOXML is supported this should be an input
taskmapRequest.attributes["cellWidth"] = cellWidth; //metres
taskmapRequest.attributes["cellHeight"] = cellHeight; //metres
taskmapRequest.attributes["startPoint"] = startPoint; // Coordinates WGS84
if (angle == null) taskmapRequest.attributes["endPoint"] = endPoint; // Coordinates WGS84
if (endPoint == null) taskmapRequest.attributes["angle"] = angle; // degrees between 0.0 and 360.0
string itemTaskCode = await _farmmapsApiService.QueueTaskAsync(cropfieldItem.Code, taskmapRequest);
await PollTask(TimeSpan.FromSeconds(5), async (tokenSource) => {
var itemTaskStatus = await _farmmapsApiService.GetTaskStatusAsync(cropfieldItem.Code, itemTaskCode);
_logger.LogInformation($"Waiting on conversion to Taskmap; status: {itemTaskStatus.State}");
if (itemTaskStatus.IsFinished)
tokenSource.Cancel();
});
var itemTask = await _farmmapsApiService.GetTaskStatusAsync(cropfieldItem.Code, itemTaskCode);
if (itemTask.State == ItemTaskState.Error)
{
_logger.LogError($"Something went wrong with task execution: {itemTask.Message}");
return null;
}
//the taskmap is a child of the input tiff
var itemName = "Taskmap";
var taskMapItem = await FindChildItemAsync(tiffItem.ParentCode,
SHAPE_PROCESSED_ITEMTYPE, itemName);
if (taskMapItem == null)
{
_logger.LogError("Could not find the shape taskmap as a child item under the input");
return null;
}
return taskMapItem;
}
public async Task<ItemTaskStatus> RunAndWaitForTask(Item subjectItem, string taskIdentifier,
Action<TaskRequest> configureCallback = null, int retrySeconds = 3) {

40
FarmmapsNbs/InputData-NBS.json Normal file
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@ -0,0 +1,40 @@
[
{
"UseCreatedCropfield": false,
"storeStatistics": false,
"file": "20210127_WDVI_plus03.tif",
"inputVariable": "wdvi",
//"InputLayerName": "Band 1",
"outputFileName": "2021.02.15.Hapreet_Singh_0127-wdvi03_2",
"plantingDate": "2020-04-15",
"measurementDate": "2020-06-27",
"potatoPurposeType": "consumption",
"targetYield": 27,
"fieldName": "Mahindra-Hapreet-Singh",
"geometryJson": {
"type": "Polygon",
"coordinates": [
[
[ 75.929090780177305, 31.639314978348551 ],
[ 75.931353489378182, 31.639409065494881 ],
[ 75.931432810729120, 31.638956841735819 ],
[ 75.929072617175663, 31.638879365370279 ],
[ 75.929090780177305, 31.639314978348551 ]
]
]
},
"GenerateTaskmap": true,
"CellWidth": "3",
"CellHeight": "10",
"StartPoint": {
"type": "Point",
"coordinates": [ 75.931432810729120, 31.638956841735819 ]
},
"EndPoint": {
"type": "Point",
"coordinates": [ 75.929072617175663, 31.638879365370279 ]
} // if no angle
//"Angle": "317.0" // if no endpoint
}
]

7
FarmmapsNbs/Models/NitrogenInput.cs
View File

@ -5,6 +5,7 @@ namespace FarmmapsNbs.Models
{
public class NitrogenInput
{
public bool UseCreatedCropfield { get; set; }
public string File { get; set; }
public string InputVariable { get; set; }
public string OutputFileName { get; set; }
@ -16,6 +17,12 @@ namespace FarmmapsNbs.Models
public string InputLayerName { get; set; }
public string fieldName{ get; set; }
public bool storeSatelliteStatistics { get; set; }
public bool GenerateTaskmap { get; set; }
public string CellWidth { get; set; }
public string CellHeight { get; set; }
public JObject StartPoint { get; set; }
public JObject EndPoint { get; set; }
public string Angle { get; set; }
}

22
FarmmapsNbs/NbsApplication.cs
View File

@ -37,7 +37,7 @@ namespace FarmmapsNbs
public async Task RunAsync()
{
var nitrogenInputJson = File.ReadAllText("NitrogenInput.json");
var nitrogenInputJson = File.ReadAllText("InputData-NBS.json"); //NitrogenInput.json
List<NitrogenInput> nitrogenInputs = JsonConvert.DeserializeObject<List<NitrogenInput>>(nitrogenInputJson);
if (!Directory.Exists(DownloadFolder))
@ -64,7 +64,7 @@ namespace FarmmapsNbs
{
// !!specify if you are using an already created cropfield:
bool useCreatedCropfield = true;
bool useCreatedCropfield = input. UseCreatedCropfield;
var plantingDate = input.PlantingDate;
var FieldName = input.fieldName;
bool StoreStatistics = input.storeSatelliteStatistics;
@ -274,13 +274,25 @@ namespace FarmmapsNbs
_logger.LogError("Could not find item for uploaded data");
return;
}
_logger.LogInformation($"Converting geotiff to shape");
var taskmap = await _generalService.GeotiffToShape(tiffItem);
if (taskmap == null) {
//_logger.LogInformation($"Converting geotiff to shape");
//var taskmap = await _generalService.GeotiffToShape(tiffItem);
//if (taskmap == null) {
// _logger.LogError("Something went wrong with geotiff to shape transformation");
// return;
//}
//ApplicationMap (GEOTIFF) To Taskmap
_logger.LogInformation($"Converting geotiff to taskmap");
var taskmap = await _generalService.CreateTaskmap(cropfieldItem, tiffItem, input.CellWidth, input.CellHeight, input.StartPoint.ToString(Formatting.None),
input.EndPoint.ToString(Formatting.None), input.Angle);
if (taskmap == null)
{
_logger.LogError("Something went wrong with geotiff to shape transformation");
return;
}
_logger.LogInformation("Downloading taskmap");
await _farmmapsApiService.DownloadItemAsync(taskmap.Code,
Path.Combine(DownloadFolder, $"{input.OutputFileName}.taskmap.zip"));

2
FarmmapsPoten/FarmmapsPoten.csproj
View File

@ -13,7 +13,7 @@
<CopyToOutputDirectory>Always</CopyToOutputDirectory>
</None>
<None Update="PotenInput.json">
<CopyToOutputDirectory>PreserveNewest</CopyToOutputDirectory>
<CopyToOutputDirectory>PreserveNewest</CopyToOutputDirectory>
</None>
</ItemGroup>

10
FarmmapsPoten/Models/PotenInput.cs
View File

@ -5,7 +5,6 @@ namespace FarmmapsPoten.Models
{
public class PotenInput
{
public bool UseShadow { get; set; }
public string File { get; set; }
public string OutputFileName { get; set; }
@ -13,6 +12,15 @@ namespace FarmmapsPoten.Models
public int PlantingYear { get; set; }
public string MeanDensity { get; set; }
public string Variation { get; set; }
public bool UseShadow { get; set; }
public JObject GeometryJson { get; set; }
public bool GenerateTaskmap { get; set; }
public string CellWidth { get; set; }
public string CellHeight { get; set; }
public JObject StartPoint { get; set; }
public JObject EndPoint { get; set; }
public string Angle { get; set; }
}
}

34
FarmmapsPoten/PotenApplication.cs
View File

@ -91,17 +91,6 @@ namespace FarmmapsVRApoten
Path.Combine(DownloadFolder, $"{input.OutputFileName}.shadow.zip"));
}
//Calculating AHN map
_logger.LogInformation("retreiving AHN map for field");
var AHNItem = await _generalService.RunAhnTask(cropfieldItem);
if (AHNItem == null) {
_logger.LogError("Something went wrong while obtaining the AHN map");
return;
}
_logger.LogInformation("Downloading AHN map");
await _farmmapsApiService.DownloadItemAsync(AHNItem.Code,
Path.Combine(DownloadFolder, $"{input.OutputFileName}_AHN.zip"));
_logger.LogInformation("Looking for local data to use");
var localDataAvailable = input.File;
@ -160,6 +149,8 @@ namespace FarmmapsVRApoten
Path.Combine(DownloadFolder, $"VRApoten_inputGeotiff_{input.OutputFileName}.zip"));
}
// create appliance map
_logger.LogInformation("Calculating application map");
@ -180,13 +171,26 @@ namespace FarmmapsVRApoten
? "Download application map completed."
: "Something went wrong while downloading.");
_logger.LogInformation($"Converting geotiff to shape");
var taskmap = await _generalService.GeotiffToShape(applianceMapItem);
if (taskmap == null) {
_logger.LogError("Something went wrong with geotiff to shape transformation");
//GEOTIFF TO Taskmap
_logger.LogInformation($"Converting geotiff to taskmap");
var taskmap = await _generalService.CreateTaskmap(cropfieldItem, applianceMapItem, input.CellWidth, input.CellHeight, input.StartPoint.ToString(Formatting.None),
input.EndPoint.ToString(Formatting.None), input.Angle);
if (taskmap == null)
{
_logger.LogError("Something went wrong with geotiff to taskmap transformation");
return;
}
////GEOTIFF TO SHAPE
//_logger.LogInformation($"Converting geotiff to shape");
//var geotiffToShapeItem= await _generalService.GeotiffToShape(applianceMapItem);
//if (taskmap == null) {
// _logger.LogError("Something went wrong with geotiff to shape transformation");
// return;
//}
_logger.LogInformation("Downloading taskmap");
await _farmmapsApiService.DownloadItemAsync(taskmap.Code,
Path.Combine(DownloadFolder, $"VRApoten_taskmap_{input.OutputFileName}.zip"));

56
FarmmapsPoten/PotenInput.json
View File

@ -1,24 +1,38 @@
[
{
"File": "PlantingSampleDataLutum.zip",
//"File": "Lutum_SampleDataPlanting.zip",
"OutputFileName": "vraPoten_SampleData",
"FieldName": "lutum",
"PlantingYear": 2020,
"MeanDensity": "30",
"Variation": "20",
"UseShadow": false,
"geometryJson": {
"type": "Polygon",
"coordinates": [
[
[ 5.66886041703652044, 52.52929999060298627 ],
[ 5.6716230923214912, 52.52946316399909676 ],
[ 5.67185376229668581, 52.5280565894154563 ],
[ 5.66903207841337231, 52.52790646510525363 ],
[ 5.66886041703652044, 52.52929999060298627 ]
]
]
{
"File": "PlantingSampleDataLutum.zip",
"OutputFileName": "20210216_vraPoten_SampleData",
"FieldName": "lutum",
"PlantingYear": 2020,
"MeanDensity": "30",
"Variation": "20",
"UseShadow": false,
"geometryJson": {
"type": "Polygon",
"coordinates": [
[
[ 5.66886041703652044, 52.52929999060298627 ],
[ 5.6716230923214912, 52.52946316399909676 ],
[ 5.67185376229668581, 52.5280565894154563 ],
[ 5.66903207841337231, 52.52790646510525363 ],
[ 5.66886041703652044, 52.52929999060298627 ]
]
]
},
"GenerateTaskmap": true,
"CellWidth": "3",
"CellHeight": "10",
"StartPoint": {
"type": "Point",
"coordinates": [ 5.66886041703652044, 52.52929999060298627 ]
},
"EndPoint": {
"type": "Point",
"coordinates": [ 5.6716230923214912, 52.52946316399909676 ]
} // if no angle
//"Angle": "317.0" // if no endpoint
}
}
]

19
FarmmapsPoten/PotenService.cs
View File

@ -25,24 +25,13 @@ namespace FarmmapsVRApoten
_generalService = generalService;
}
public async Task<Item> CalculateApplicationMapAsync(Item cropfieldItem, Item inputItem,string meanDensity, string variation)
public async Task<Item> CalculateApplicationMapAsync(Item cropfieldItem, Item inputItem, string meanDensity, string variation)
{
var potenApplicationMapRequest = new TaskRequest() { TaskType = VRAPLANTING_TASK };
if (inputItem != null) {potenApplicationMapRequest.attributes["inputCode"] = inputItem.Code; }
potenApplicationMapRequest.attributes["meanDensity"] = meanDensity;
potenApplicationMapRequest.attributes["variation"] = variation;
//var taskCode = await _farmmapsApiService.QueueTaskAsync(cropfieldItem.Code, potenApplicationMapRequest);
//await PollTask(TimeSpan.FromSeconds(3), async (tokenSource) =>
//{
// _logger.LogInformation("Checking VRAPoten task status");
// var itemTaskStatus = await _farmmapsApiService.GetTaskStatusAsync(cropfieldItem.Code, taskCode);
// // Code
// if (itemTaskStatus.IsFinished)
// tokenSource.Cancel();
//});
var taskCode = await _farmmapsApiService.QueueTaskAsync(cropfieldItem.Code, potenApplicationMapRequest);
_logger.LogInformation($"itemTaskCode: {taskCode}");
@ -50,8 +39,6 @@ namespace FarmmapsVRApoten
_logger.LogInformation($"potenTaskmapRequest type: {potenApplicationMapRequest.TaskType}");
_logger.LogInformation($"cropfieldItemCode: {cropfieldItem.Code}");
await PollTask(TimeSpan.FromSeconds(5), async (tokenSource) => {
var itemTaskStatus = await _farmmapsApiService.GetTaskStatusAsync(cropfieldItem.Code, taskCode);
_logger.LogInformation($"Waiting on calculation of application map; Status: {itemTaskStatus.State}");
@ -60,7 +47,6 @@ namespace FarmmapsVRApoten
});
var itemTask = await _farmmapsApiService.GetTaskStatusAsync(cropfieldItem.Code, taskCode);
if (itemTask.State == ItemTaskState.Error)
{
@ -84,8 +70,7 @@ namespace FarmmapsVRApoten
}
}
}
}

302
FarmmapsPoten_AVRapi/Data/PlantingSampleDataLutum.json Normal file
View File

@ -0,0 +1,302 @@
{
"type": "FeatureCollection",
"name": "PlantingSampleDataLutum",
"crs": { "type": "name", "properties": { "name": "urn:ogc:def:crs:OGC:1.3:CRS84" } },
"features": [
{ "type": "Feature", "properties": { "lutum": 16 }, "geometry": { "type": "Point", "coordinates": [ 5.669006678383711, 52.529290221274948 ] } },
{ "type": "Feature", "properties": { "lutum": 13 }, "geometry": { "type": "Point", "coordinates": [ 5.669006104248043, 52.529200349555097 ] } },
{ "type": "Feature", "properties": { "lutum": 13 }, "geometry": { "type": "Point", "coordinates": [ 5.669005530115061, 52.529110477833399 ] } },
{ "type": "Feature", "properties": { "lutum": 16 }, "geometry": { "type": "Point", "coordinates": [ 5.669004955984766, 52.529020606109889 ] } },
{ "type": "Feature", "properties": { "lutum": 13 }, "geometry": { "type": "Point", "coordinates": [ 5.669004381857157, 52.528930734384545 ] } },
{ "type": "Feature", "properties": { "lutum": 15 }, "geometry": { "type": "Point", "coordinates": [ 5.669003807732236, 52.528840862657354 ] } },
{ "type": "Feature", "properties": { "lutum": 12 }, "geometry": { "type": "Point", "coordinates": [ 5.66900323361, 52.528750990928309 ] } },
{ "type": "Feature", "properties": { "lutum": 15 }, "geometry": { "type": "Point", "coordinates": [ 5.669002659490453, 52.528661119197444 ] } },
{ "type": "Feature", "properties": { "lutum": 14 }, "geometry": { "type": "Point", "coordinates": [ 5.669002085373592, 52.528571247464789 ] } },
{ "type": "Feature", "properties": { "lutum": 16 }, "geometry": { "type": "Point", "coordinates": [ 5.669001511259415, 52.528481375730252 ] } },
{ "type": "Feature", "properties": { "lutum": 16 }, "geometry": { "type": "Point", "coordinates": [ 5.669000937147927, 52.528391503993873 ] } },
{ "type": "Feature", "properties": { "lutum": 15 }, "geometry": { "type": "Point", "coordinates": [ 5.669000363039124, 52.52830163225569 ] } },
{ "type": "Feature", "properties": { "lutum": 17 }, "geometry": { "type": "Point", "coordinates": [ 5.669154039708354, 52.529289871032709 ] } },
{ "type": "Feature", "properties": { "lutum": 17 }, "geometry": { "type": "Point", "coordinates": [ 5.669153465272641, 52.529199999313761 ] } },
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{ "type": "Feature", "properties": { "lutum": 17 }, "geometry": { "type": "Point", "coordinates": [ 5.669440712093158, 52.528030965793008 ] } },
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]
}

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FarmmapsPoten_AVRapi/Data/PlantingSampleDataLutum.zip Normal file
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FarmmapsPoten_AVRapi/FarmmapsPoten_AVRapi.csproj Normal file
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<Project Sdk="Microsoft.NET.Sdk">
<PropertyGroup>
<OutputType>Exe</OutputType>
<TargetFramework>netcoreapp3.1</TargetFramework>
</PropertyGroup>
<ItemGroup>
<None Update="appsettings.json">
<CopyToOutputDirectory>Always</CopyToOutputDirectory>
</None>
<None Update="Data\**\*">
<CopyToOutputDirectory>Always</CopyToOutputDirectory>
</None>
<None Update="PotenInputAVR.json">
<CopyToOutputDirectory>PreserveNewest</CopyToOutputDirectory>
</None>
</ItemGroup>
<ItemGroup>
<ProjectReference Include="..\FarmmapsApi\FarmmapsApi.csproj" />
</ItemGroup>
</Project>

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FarmmapsPoten_AVRapi/Models/PotenInputAVR.cs Normal file
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using System;
using Newtonsoft.Json.Linq;
namespace FarmmapsPoten_AVRapi.Models
{
public class PotenInputAVR
{
public string File { get; set; }
public string OutputFileName { get; set; }
public string FieldName { get; set; }
public int PlantingYear { get; set; }
public string MeanDensity { get; set; }
public string Variation { get; set; }
public bool UseShadow { get; set; }
public bool ConvertToCountPerArea { get; set; }
public string Rijbreedte_m { get; set; }
public JObject GeometryJson { get; set; }
public bool GenerateTaskmap { get; set; }
public string CellWidth { get; set; }
public string CellHeight { get; set; }
public JObject StartPoint { get; set; }
public JObject EndPoint { get; set; }
public string Angle { get; set; }
}
}

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FarmmapsPoten_AVRapi/PotenApplicationAVR.cs Normal file
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using System;
using System.Collections.Generic;
using System.IO;
using System.Linq;
using System.Threading.Tasks;
using FarmmapsApi;
using FarmmapsApi.Models;
using FarmmapsApi.Services;
using FarmmapsPoten_AVRapi.Models;
using Microsoft.Extensions.Logging;
using Newtonsoft.Json;
using static FarmmapsApiSamples.Constants;
namespace FarmmapsVRApoten
{
public class PotenApplicationAVR : IApplication
{
private const string DownloadFolder = "Downloads";
private readonly ILogger<PotenApplicationAVR> _logger;
private readonly FarmmapsApiService _farmmapsApiService;
private readonly PotenServiceAVR _potenService;
private readonly GeneralService _generalService;
public PotenApplicationAVR(ILogger<PotenApplicationAVR> logger, FarmmapsApiService farmmapsApiService,
GeneralService generalService, PotenServiceAVR potenService)
{
_logger = logger;
_farmmapsApiService = farmmapsApiService;
_generalService = generalService;
_potenService = potenService;
}
public async Task RunAsync()
{
// read field data from separate json file
var VRAPotenInputJson = File.ReadAllText("PotenInputAVR.json");
List<PotenInputAVR> potenInputs = JsonConvert.DeserializeObject<List<PotenInputAVR>>(VRAPotenInputJson);
if (!Directory.Exists(DownloadFolder))
Directory.CreateDirectory(DownloadFolder);
// !! this call is needed the first time an api is called with a fresh clientid and secret !!
await _farmmapsApiService.GetCurrentUserCodeAsync();
var roots = await _farmmapsApiService.GetCurrentUserRootsAsync();
foreach (var input in potenInputs)
{
try
{
await Process(roots, input);
}
catch (Exception ex)
{
_logger.LogError(ex.Message);
}
}
}
private async Task Process(List<UserRoot> roots, PotenInputAVR input)
{
var meanDensity = input.MeanDensity;
var variation = input.Variation;
var fieldName = input.FieldName;
bool useShadow = input.UseShadow;
bool convertToCountPerArea = input.ConvertToCountPerArea;
string rijBreedte_m = input.Rijbreedte_m;
var myDrive = roots.SingleOrDefault(r => r.Name == "My drive");
if (myDrive == null)
{
_logger.LogError("Could not find a needed root item");
return;
}
var uploadedRoot = roots.SingleOrDefault(r => r.Name == "Uploaded");
if (uploadedRoot == null)
{
_logger.LogError("Could not find a needed root item");
return;
}
_logger.LogInformation("Creating cropfield");
var cropfieldItem = await _generalService.CreateCropfieldItemAsync(myDrive.Code,
$"VRA Poten cropfield {input.OutputFileName}", input.PlantingYear,
input.GeometryJson.ToString(Formatting.None));
//Calculating shadow map
if (useShadow)
{
_logger.LogInformation("Calculate shadow map for field");
var shadowItem = await _generalService.RunShadowTask(cropfieldItem);
if (shadowItem == null)
{
_logger.LogError("Something went wrong while obtaining the shadow map");
return;
}
_logger.LogInformation("Downloading shadow map");
await _farmmapsApiService.DownloadItemAsync(shadowItem.Code,
Path.Combine(DownloadFolder, $"{input.OutputFileName}.shadow.zip"));
}
_logger.LogInformation("Looking for local data to use");
var localDataAvailable = input.File;
var geotiffItem = (Item)null;
if (String.IsNullOrEmpty(localDataAvailable))
{
_logger.LogInformation("Could not find item for uploaded data, using BOFEK");
//Retreiving BOFEK
_logger.LogInformation("Get BOFEK for field");
var bofekItem = await _generalService.RunBofekTask(cropfieldItem);
if (bofekItem == null)
{
_logger.LogError("Something went wrong while obtaining the BOFEK data");
return;
}
_logger.LogInformation("Downloading Bofek map");
await _farmmapsApiService.DownloadItemAsync(bofekItem.Code,
Path.Combine(DownloadFolder, $"{input.OutputFileName}.BOFEK.zip"));
}
else if (input.File.Contains(".tif") || input.File.Contains(".geotiff"))
{
_logger.LogInformation("input = tiff data");
var dataPath = Path.Combine("Data", input.File);
geotiffItem = await _generalService.UploadDataAsync(uploadedRoot, GEOTIFF_PROCESSED_ITEMTYPE, dataPath,
Path.GetFileNameWithoutExtension(input.File));
if (geotiffItem == null)
{
_logger.LogError("Could not find item for uploaded data");
return;
}
}
else
{
var isGeoJson = input.File.Contains("json");
var dataPath = Path.Combine("Data", input.File);
var shapeItem = isGeoJson
? await _generalService.UploadDataAsync(uploadedRoot, SHAPE_PROCESSED_ITEMTYPE, dataPath,
Path.GetFileNameWithoutExtension(input.File))
: await _generalService.UploadZipWithShapeAsync(uploadedRoot, dataPath,
Path.GetFileNameWithoutExtension(input.File));
if (shapeItem == null)
{
_logger.LogError("Something went wrong while searching for the shape file");
return;
}
// transform shape to geotiff as VRA poten only supports tiff input item
_logger.LogInformation($"Converting shape to geotiff");
geotiffItem = await _generalService.ShapeToGeotiff(shapeItem);
if (geotiffItem == null)
{
_logger.LogError("Something went wrong with shape to geotiff transformation");
return;
}
_logger.LogInformation("Downloading geotiff file");
await _farmmapsApiService.DownloadItemAsync(geotiffItem.Code,
Path.Combine(DownloadFolder, $"VRApoten_inputGeotiff_{input.OutputFileName}.zip"));
}
// create appliance map
_logger.LogInformation("Calculating application map");
// INPUT IS NEEDED as GEOTIFF
var applianceMapItem =
await _potenService.CalculateApplicationMapAsync(cropfieldItem, geotiffItem, meanDensity, variation);
if (applianceMapItem == null)
{
return;
}
_logger.LogInformation("Downloading application map");
await _farmmapsApiService.DownloadItemAsync(applianceMapItem.Code,
Path.Combine(DownloadFolder, $"VRApoten_appliancemap_{input.OutputFileName}.zip"));
string finalOutput = Path.Combine(DownloadFolder, $"VRApoten_appliancemap_{input.OutputFileName}.zip");
_logger.LogInformation(File.Exists(finalOutput)
? "Download application map completed."
: "Something went wrong while downloading.");
// if convertToCountPerArea == True, than recalculate pootafstand in cm to # of poters/m2 from the geotiffItem with the use of the zoneringsTask
if (convertToCountPerArea)
{
applianceMapItem =
await _potenService.ConvertToCountPerAreaTroughZonering(cropfieldItem, applianceMapItem, input.Rijbreedte_m);
}
//Appliancemap (GEOTIFF) TO Taskmap
if (input.GenerateTaskmap == true)
{
_logger.LogInformation($"Converting geotiff to taskmap");
var taskmap = await _generalService.CreateTaskmap(cropfieldItem, applianceMapItem, input.CellWidth, input.CellHeight, input.StartPoint.ToString(Formatting.None),
input.EndPoint.ToString(Formatting.None), input.Angle);
if (taskmap == null)
{
_logger.LogError("Something went wrong with geotiff to shape transformation");
return;
}
_logger.LogInformation("Downloading taskmap");
await _farmmapsApiService.DownloadItemAsync(taskmap.Code,
Path.Combine(DownloadFolder, $"VRApoten_taskmap_{input.OutputFileName}.zip"));
}
}
}
}

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FarmmapsPoten_AVRapi/PotenInputAVR.json Normal file
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[
{
"File": "PlantingSampleDataLutum.zip",
"OutputFileName": "20210216_SampleData_CovertArea",
"FieldName": "lutum",
"PlantingYear": 2021,
"MeanDensity": "30",
"Variation": "20",
"UseShadow": false,
"ConvertToCountPerArea": true,
"Rijbreedte_m": "0.75", //as string
"geometryJson": {
"type": "Polygon",
"coordinates": [
[
[ 5.66886041703652044, 52.52929999060298627 ],
[ 5.6716230923214912, 52.52946316399909676 ],
[ 5.67185376229668581, 52.5280565894154563 ],
[ 5.66903207841337231, 52.52790646510525363 ],
[ 5.66886041703652044, 52.52929999060298627 ]
]
]
},
// if taskmap is not generated, output is only geotiff
"GenerateTaskmap": true,
"CellWidth": "3",
"CellHeight": "10",
"StartPoint": {
"type": "Point",
"coordinates": [ 5.66886041703652044, 52.52929999060298627 ]
},
"EndPoint": {
"type": "Point",
"coordinates": [ 5.6716230923214912, 52.52946316399909676 ]
} // if no angle
//"Angle": "317.0" // if no endpoint
}
]

120
FarmmapsPoten_AVRapi/PotenServiceAVR.cs Normal file
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using System;
using System.Globalization;
using System.Threading.Tasks;
using FarmmapsApi.Models;
using FarmmapsApi.Services;
using Microsoft.Extensions.Logging;
using Newtonsoft.Json;
using static FarmmapsApi.Extensions;
using static FarmmapsApiSamples.Constants;
namespace FarmmapsVRApoten
{
public class PotenServiceAVR
{
private readonly ILogger<PotenServiceAVR> _logger;
private readonly FarmmapsApiService _farmmapsApiService;
private readonly GeneralService _generalService;
public PotenServiceAVR(ILogger<PotenServiceAVR> logger, FarmmapsApiService farmmapsApiService,
GeneralService generalService)
{
_logger = logger;
_farmmapsApiService = farmmapsApiService;
_generalService = generalService;
}
public async Task<Item> CalculateApplicationMapAsync(Item cropfieldItem, Item inputItem, string meanDensity, string variation)
{
var potenApplicationMapRequest = new TaskRequest() { TaskType = VRAPLANTING_TASK };
if (inputItem != null) { potenApplicationMapRequest.attributes["inputCode"] = inputItem.Code; }
potenApplicationMapRequest.attributes["meanDensity"] = meanDensity;
potenApplicationMapRequest.attributes["variation"] = variation;
var taskCode = await _farmmapsApiService.QueueTaskAsync(cropfieldItem.Code, potenApplicationMapRequest);
_logger.LogInformation($"itemTaskCode: {taskCode}");
_logger.LogInformation($"potenTaskmapRequest: {potenApplicationMapRequest}");
_logger.LogInformation($"potenTaskmapRequest type: {potenApplicationMapRequest.TaskType}");
_logger.LogInformation($"cropfieldItemCode: {cropfieldItem.Code}");
await PollTask(TimeSpan.FromSeconds(5), async (tokenSource) =>
{
var itemTaskStatus = await _farmmapsApiService.GetTaskStatusAsync(cropfieldItem.Code, taskCode);
_logger.LogInformation($"Waiting on calculation of application map; Status: {itemTaskStatus.State}");
if (itemTaskStatus.IsFinished)
tokenSource.Cancel();
});
var itemTask = await _farmmapsApiService.GetTaskStatusAsync(cropfieldItem.Code, taskCode);
if (itemTask.State == ItemTaskState.Error)
{
_logger.LogError($"Something went wrong with task execution: {itemTask.Message}");
return null;
}
var itemName = $"VRAPoten";
var applianceMapItem = await _generalService.FindChildItemAsync(cropfieldItem.Code,
GEOTIFF_PROCESSED_ITEMTYPE, itemName,
i => i.Updated >= itemTask.Finished.GetValueOrDefault(DateTime.UtcNow) &&
i.Name.ToLower().Contains(itemName.ToLower()));
if (applianceMapItem == null)
{
_logger.LogError("Could not find the VRAPoten geotiff child item under cropfield");
return null;
}
return applianceMapItem;
}
// Extra task making use of the zonering task to convert the planting distance in cm to number of seeds per m2 !!! mind the hardcoded values !!!
public async Task<Item> ConvertToCountPerAreaTroughZonering(Item cropfieldItem, Item geotiffItem, string rijBreedte_m)
{
var zoneringTaskRequest = new TaskRequest() { TaskType = VRAZONERING_TASK };
zoneringTaskRequest.attributes["formula"] = $"((100/[0])/{rijBreedte_m})";
zoneringTaskRequest.attributes["output"] = "{\"Name\":\"CountPerAreaConversion\",\"Quantity\":\"CountPerArea\",\"Unit\":\"#/m2\"}";
zoneringTaskRequest.attributes["inputs"] = $"[{{\"ItemCode\":\"{geotiffItem.Code}\",\"LayerName\":\"Appliancemap\"}}]";
var taskCode = await _farmmapsApiService.QueueTaskAsync(cropfieldItem.Code, zoneringTaskRequest);
await PollTask(TimeSpan.FromSeconds(5), async (tokenSource) =>
{
var itemTaskStatus = await _farmmapsApiService.GetTaskStatusAsync(cropfieldItem.Code, taskCode);
_logger.LogInformation($"Waiting on convertion to Count per area through zoneringTast; Status: {itemTaskStatus.State}");
if (itemTaskStatus.IsFinished)
tokenSource.Cancel();
});
var itemTask = await _farmmapsApiService.GetTaskStatusAsync(cropfieldItem.Code, taskCode);
if (itemTask.State == ItemTaskState.Error)
{
_logger.LogError($"Something went wrong with task execution: {itemTask.Message}");
return null;
}
var applianceMapItem = await _generalService.FindChildItemAsync(cropfieldItem.Code,
GEOTIFF_PROCESSED_ITEMTYPE, "CountPerAreaConversion",
i => i.Updated >= itemTask.Finished.GetValueOrDefault(DateTime.UtcNow) &&
i.Name.ToLower().Contains("CountPerAreaConversion".ToLower()));
if (applianceMapItem == null)
{
_logger.LogError("Could not find the converted to count per area geotiff child item under cropfield");
return null;
}
return applianceMapItem;
}
}
}

23
FarmmapsPoten_AVRapi/Program.cs Normal file
View File

@ -0,0 +1,23 @@
using System.Threading.Tasks;
using FarmmapsApi;
using Microsoft.Extensions.DependencyInjection;
using Microsoft.Extensions.Logging;
namespace FarmmapsVRApoten
{
class Program : FarmmapsProgram<PotenApplicationAVR>
{
private static async Task Main(string[] args)
{
await new Program().Start(args);
}
protected override void Configure(IServiceCollection serviceCollection)
{
serviceCollection.AddLogging(opts => opts
.AddConsole()
.AddFilter("System.Net.Http", LogLevel.Warning))
.AddTransient<PotenServiceAVR>();
}
}
}

10
FarmmapsPoten_AVRapi/appsettings.json Normal file
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@ -0,0 +1,10 @@
{
"Authority": "https://accounts.test.farmmaps.eu/",
"Endpoint": "https://test.farmmaps.eu/",
"BasePath": "api/v1",
"DiscoveryEndpointUrl": "https://accounts.test.farmmaps.eu/.well-known/openid-configuration",
"RedirectUri": "http://example.nl/api",
"ClientId": "",
"ClientSecret": "",
"Scopes": [ "api" ]
}

BIN
FarmmapsZonering/Data/VRApoten_appliancemap_20210215_vraPoten_SampleData_CovertArea.tif Normal file
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Binary file not shown.

4
FarmmapsZonering/FarmmapsZonering.csproj
View File

@ -23,5 +23,9 @@
<ItemGroup>
<ProjectReference Include="..\FarmmapsApi\FarmmapsApi.csproj" />
</ItemGroup>
<ItemGroup>
<Folder Include="Data" />
</ItemGroup>
</Project>

13
FarmmapsZonering/Services/ZoneringService.cs
View File

@ -49,17 +49,10 @@ namespace FarmmapsZonering.Services
return null;
}
var uploadedFilesChildren = await _farmmapsApiService.GetItemChildrenAsync(cropfieldItem.Code);
//int last = uploadedFilesChildren.Count - 1;
//var applianceMapItem = uploadedFilesChildren[last];
var itemName = output.Name;
//var itemName = $"VRAZonering";
var applianceMapItem = await _generalService.FindChildItemAsync(cropfieldItem.Code,
GEOTIFF_PROCESSED_ITEMTYPE, itemName,
i => i.Updated >= itemTask.Finished.GetValueOrDefault(DateTime.UtcNow) &&
i.Name.ToLower().Contains(itemName.ToLower()));
GEOTIFF_PROCESSED_ITEMTYPE, output.Name,
i => i.Updated >= itemTask.Finished.GetValueOrDefault(DateTime.UtcNow) &&
i.Name.ToLower().Contains(output.Name.ToLower()));
if (applianceMapItem == null)
{

29
FarmmapsZonering/ZoneringApplication.cs
View File

@ -91,7 +91,7 @@ namespace FarmmapsZonering
}
Item cropfieldItem;
if (string.IsNullOrEmpty(_settings.CropfieldItemCode) || input.CreateNewCropfield == true)
if (input.CreateNewCropfield == true) // || string.IsNullOrEmpty(_settings.CropfieldItemCode) ## CHECK IT!!
{
_logger.LogInformation("Creating cropfield");
@ -102,6 +102,7 @@ namespace FarmmapsZonering
_settings.CropfieldName = cropfieldItem.Name;
_settings.CropfieldItemCode = cropfieldItem.Code;
SaveSettings(settingsfile);
}
else
{
@ -142,19 +143,20 @@ namespace FarmmapsZonering
var inputOneItem = await _generalService.UploadDataAsync(uploadedRoot, GEOTIFF_PROCESSED_ITEMTYPE,
Path.Combine("Data", $"{input.InputItemOne}"), Path.GetFileNameWithoutExtension($"{input.InputItemOne}"));
if (inputOneItem == null) {
if (inputOneItem == null)
{
_logger.LogError("Could not find item for uploaded data");
return;
}
var inputTwoItem = await _generalService.UploadDataAsync(uploadedRoot, GEOTIFF_PROCESSED_ITEMTYPE,
Path.Combine("Data", $"{input.InputItemTwo}"), Path.GetFileNameWithoutExtension($"{input.InputItemTwo}"));
//var inputTwoItem = await _generalService.UploadDataAsync(uploadedRoot, GEOTIFF_PROCESSED_ITEMTYPE,
// Path.Combine("Data", $"{input.InputItemTwo}"), Path.GetFileNameWithoutExtension($"{input.InputItemTwo}"));
if (inputTwoItem == null) {
_logger.LogError("Could not find item for uploaded data");
return;
}
//if (inputTwoItem == null) {
// _logger.LogError("Could not find item for uploaded data");
// return;
//}
var outputItem = await _zoneringService.CreateApplicationMapAsync(cropfieldItem, input.Formula, new Output()
{
@ -167,16 +169,15 @@ namespace FarmmapsZonering
{
ItemCode = inputOneItem.Code,
LayerName = inputOneItem.Data["layers"][0]["name"].ToString()
},
new InputParameter()
{
ItemCode = inputTwoItem.Code,
LayerName = inputTwoItem.Data["layers"][0]["name"].ToString()
//},
//new InputParameter()
//{
// ItemCode = inputTwoItem.Code,
// LayerName = inputTwoItem.Data["layers"][0]["name"].ToString()
});
_logger.LogInformation("Downloading output");
_logger.LogInformation($"outputitem: {outputItem} with code {outputItem.Code} and date {outputItem.DataDate}");
//_logger.LogInformation($"Data: {outputItem.Data}");
await _farmmapsApiService.DownloadItemAsync(outputItem.Code,

185
FarmmapsZonering/ZoneringInput.json
View File

@ -1,102 +1,99 @@
//[
//Formule kan meerdere inputs aan
// Met blokhaken en een nummer specificeer je een input:
//[0], [10]. etc...
// Aan de hand van de volgorde van input wordt momenteel bepaald welk nummer bij welk input hoort.
//[0] is dus de eerst tiff opgegeven.Als het goed is maakt het nummer nu niks uit, dus als er 2 inputs zijn en in de formule staan[0] en[10] dan zal die nog steeds werken.
//De volgorde van de tiff kun je verslepen, bij de formule inputs kun je de input van het ene[0] slot naar het andere slepen[10]
//Functies: abs, min en max
//Constanten: pi en e
//if ([0] -[1])/ ([0] +[1]) < 0 then 0
//else if ([0] -[1])/ ([0] +[1]) > 1 then 1
//else ([0] -[1]) / ([0] +[1])
//{
// "InputItemOne": "20201106_Sentinel2_L2A_B04.tiff",
// "InputItemTwo": "20201106_Sentinel2_L2A_B08.tiff",
// "Formula": "([1]-[0])/([1]+[0])",
// "CreatedLayerName": "Biomassa",
// "CalculatedQuantity": "NDVI",
// "CalculatedUnit": "ndviValue",
// "OutputFileName": "FullField_NDVI",
// "CropFieldName": "FullField",
// "CreateNewCropfield": false,
// "CropYear": 2020,
// "geometryJson": {
// "type": "Polygon",
// "coordinates": [
// [
// [ 4.9593709, 52.8014339 ],
// [ 4.9675488, 52.7943149 ],
// [ 4.9735195, 52.7968665 ],
// [ 4.9667833, 52.8030414 ],
// [ 4.9593709, 52.8014339 ]
// ]
// ]
// },
[
//{
// "InputItemOne": "20210127_L2A_B08_(Raw).tiff",
// "InputItemTwo": "20210127_L2A_B04_(Raw).tiff",
// "Formula": "([0]-[1])/([0]+[1])+0.3",
// "CalculatedLayerName": "Biomassa",
// "CalculatedQuantity": "NDVI",
// "CalculatedUnit": "wdviValue",
// "OutputFileName": "20210212_NDVI-test",
// "CropFieldName": "Mahindra-Hapreet_Singh-2",
// "UseShadow": false,
// "GetWatBal": false,
// "GetVanDerSat": false,
// "storeVanDerSatStatistics": false,
// "CropYear": 2020,
// "geometryJson": {
// "type": "Polygon",
// "coordinates": [
// [
// [ 31.63887936537028, 75.92907261717566 ],
// [ 31.63895684173582, 75.93143281072912 ],
// [ 31.63940906549488, 75.93135348937818 ],
// [ 31.63931497834855, 75.9290907801773 ],
// [ 31.63887936537028, 75.92907261717566 ]
// ]
// ]
//Formule kan meerdere inputs aan
// Met blokhaken en een nummer specificeer je een input:
//[0], [10]. etc...
// Aan de hand van de volgorde van input wordt momenteel bepaald welk nummer bij welk input hoort.
//[0] is dus de eerst tiff opgegeven.Als het goed is maakt het nummer nu niks uit, dus als er 2 inputs zijn en in de formule staan[0] en[10] dan zal die nog steeds werken.
//De volgorde van de tiff kun je verslepen, bij de formule inputs kun je de input van het ene[0] slot naar het andere slepen[10]
//Functies: abs, min en max
//Constanten: pi en e
// }
//}
//if ([0] -[1])/ ([0] +[1]) < 0 then 0
//else if ([0] -[1])/ ([0] +[1]) > 1 then 1
//else ([0] -[1]) / ([0] +[1])
{
"InputItemOne": "2020-04-22_sentinel-2_l2a_b08.tiff",
"InputItemTwo": "2020-04-22_sentinel-2_l2a_b04.tiff",
"Formula": "([0]-[1])/([0]+[1])",
"CalculatedLayerName": "Biomassa",
"CalculatedQuantity": "NDVI",
"CalculatedUnit": "ndviValue",
"OutputFileName": "20210212_NDVI-test_FS",
"CropFieldName": "MestSiloAduard",
"UseShadow": false,
"GetWatBal": false,
"GetVanDerSat": false,
"storeVanDerSatStatistics": false,
"CropYear": 2020,
"geometryJson": {
"type": "Polygon",
"coordinates": [
[
[ 6.48274677, 53.25861525 ],
[ 6.48740108, 53.25799841 ],
[ 6.48756130, 53.25934424 ],
[ 6.48285892, 53.25953650 ],
[ 6.48274677, 53.25861525 ]
]
]
//{
// "InputItemOne": "20201106_Sentinel2_L2A_B04.tiff",
// "InputItemTwo": "20201106_Sentinel2_L2A_B08.tiff",
// "Formula": "([1]-[0])/([1]+[0])",
// "CreatedLayerName": "Biomassa",
// "CalculatedQuantity": "NDVI",
// "CalculatedUnit": "ndviValue",
// "OutputFileName": "FullField_NDVI",
// "CropFieldName": "FullField",
// "CreateNewCropfield": false,
// "CropYear": 2020,
// "geometryJson": {
// "type": "Polygon",
// "coordinates": [
// [
// [ 4.9593709, 52.8014339 ],
// [ 4.9675488, 52.7943149 ],
// [ 4.9735195, 52.7968665 ],
// [ 4.9667833, 52.8030414 ],
// [ 4.9593709, 52.8014339 ]
// ]
// ]
// }
//,
//{
// "InputItemOne": "data_9001.tif",
// "InputItemTwo": "data_times_two_4326.tiff",
// "Formula": "if [0] >= 1.28 then [1] else 0",
// "CreatedLayerName": "Biomassa",
// "CalculatedQuantity": "NDVI",
// "CalculatedUnit": "ndviValue",
// "OutputFileName": "Zoning",
// "CropFieldName": "Data_whole",
// "UseShadow": false,
// "GetWatBal": false,
// "GetVanDerSat": false,
// "storeVanDerSatStatistics": false,
// "CropYear": 2020,
// "geometryJson": {
// "type": "Polygon",
// "coordinates": [
// [
// [ 5.66886041703652044, 52.52929999060298627 ],
// [ 5.6716230923214912, 52.52946316399909676 ],
// [ 5.67185376229668581, 52.5280565894154563 ],
// [ 5.66903207841337231, 52.52790646510525363 ],
// [ 5.66886041703652044, 52.52929999060298627 ]
// ]
// ]
// }
//},
{
"InputItemOne": "VRApoten_appliancemap_20210215_vraPoten_SampleData_CovertArea.tif",
//"InputItemTwo": "",
"Formula": "((100/[0])/0.75)",
"LayerName": "CountPerAreaConversion",
"CalculatedQuantity": "CountPerArea",
"CalculatedUnit": "#/m2",
"OutputFileName": "CountPerAreaConversionOutput",
"CropFieldName": "ZoningCpA",
"CreateNewCropfield": true,
"UseShadow": false,
"GetWatBal": false,
"GetVanDerSat": false,
"storeVanDerSatStatistics": false,
"CropYear": 2020,
"geometryJson": {
"type": "Polygon",
"coordinates": [
[
[ 5.66886041703652044, 52.52929999060298627 ],
[ 5.6716230923214912, 52.52946316399909676 ],
[ 5.67185376229668581, 52.5280565894154563 ],
[ 5.66903207841337231, 52.52790646510525363 ],
[ 5.66886041703652044, 52.52929999060298627 ]
]
]
}
}
}
]