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Update zonering to find the right output files

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Added taskmap creator to NBS
This commit is contained in:
Riepma 2021-02-15 17:06:09 +01:00
parent c02b232837
commit 101b683daa
9 changed files with 194 additions and 95 deletions
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9
FarmmapsApi/Services/GeneralService.cs
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@ -107,26 +107,27 @@ namespace FarmmapsApi.Services
} }
// Create taskmap based on width, height and direction // Create taskmap based on width, height and direction
public async Task<Item> CreateTaskmap(Item tiffItem, string cellWidth, string cellHeight, string startPoint, string endPoint = null, string angle = null) public async Task<Item> CreateTaskmap(Item cropfieldItem, Item tiffItem, string cellWidth, string cellHeight, string startPoint, string endPoint = null, string angle = null)
{ {
var taskmapRequest = new TaskRequest { TaskType = TASKMAP_TASK }; var taskmapRequest = new TaskRequest { TaskType = TASKMAP_TASK };
taskmapRequest.attributes["inputCode"] = tiffItem.Code; taskmapRequest.attributes["inputCode"] = tiffItem.Code;
taskmapRequest.attributes["operation"] = "shape"; // Currently onlye "shape" supported, if ISOXML is supported this should be an input
taskmapRequest.attributes["cellWidth"] = cellWidth; //metres taskmapRequest.attributes["cellWidth"] = cellWidth; //metres
taskmapRequest.attributes["cellHeight"] = cellHeight; //metres taskmapRequest.attributes["cellHeight"] = cellHeight; //metres
taskmapRequest.attributes["startPoint"] = startPoint; // Coordinates WGS84 taskmapRequest.attributes["startPoint"] = startPoint; // Coordinates WGS84
if (angle == null) taskmapRequest.attributes["endPoint"] = endPoint; // Coordinates WGS84 if (angle == null) taskmapRequest.attributes["endPoint"] = endPoint; // Coordinates WGS84
if (endPoint == null) taskmapRequest.attributes["angle"] = angle; // degrees between 0.0 and 360.0 if (endPoint == null) taskmapRequest.attributes["angle"] = angle; // degrees between 0.0 and 360.0
string itemTaskCode = await _farmmapsApiService.QueueTaskAsync(tiffItem.Code, taskmapRequest); string itemTaskCode = await _farmmapsApiService.QueueTaskAsync(cropfieldItem.Code, taskmapRequest);
await PollTask(TimeSpan.FromSeconds(5), async (tokenSource) => { await PollTask(TimeSpan.FromSeconds(5), async (tokenSource) => {
var itemTaskStatus = await _farmmapsApiService.GetTaskStatusAsync(tiffItem.Code, itemTaskCode); var itemTaskStatus = await _farmmapsApiService.GetTaskStatusAsync(cropfieldItem.Code, itemTaskCode);
_logger.LogInformation($"Waiting on conversion to Taskmap; status: {itemTaskStatus.State}"); _logger.LogInformation($"Waiting on conversion to Taskmap; status: {itemTaskStatus.State}");
if (itemTaskStatus.IsFinished) if (itemTaskStatus.IsFinished)
tokenSource.Cancel(); tokenSource.Cancel();
}); });
var itemTask = await _farmmapsApiService.GetTaskStatusAsync(tiffItem.Code, itemTaskCode); var itemTask = await _farmmapsApiService.GetTaskStatusAsync(cropfieldItem.Code, itemTaskCode);
if (itemTask.State == ItemTaskState.Error) if (itemTask.State == ItemTaskState.Error)
{ {
_logger.LogError($"Something went wrong with task execution: {itemTask.Message}"); _logger.LogError($"Something went wrong with task execution: {itemTask.Message}");

40
FarmmapsNbs/InputData-NBS.json Normal file
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@ -0,0 +1,40 @@
[
{
"UseCreatedCropfield": false,
"storeStatistics": false,
"file": "20210127_WDVI_plus03.tif",
"inputVariable": "wdvi",
//"InputLayerName": "Band 1",
"outputFileName": "2021.02.15.Hapreet_Singh_0127-wdvi03_2",
"plantingDate": "2020-04-15",
"measurementDate": "2020-06-27",
"potatoPurposeType": "consumption",
"targetYield": 27,
"fieldName": "Mahindra-Hapreet-Singh",
"geometryJson": {
"type": "Polygon",
"coordinates": [
[
[ 75.929090780177305, 31.639314978348551 ],
[ 75.931353489378182, 31.639409065494881 ],
[ 75.931432810729120, 31.638956841735819 ],
[ 75.929072617175663, 31.638879365370279 ],
[ 75.929090780177305, 31.639314978348551 ]
]
]
},
"GenerateTaskmap": true,
"CellWidth": "3",
"CellHeight": "10",
"StartPoint": {
"type": "Point",
"coordinates": [ 75.931432810729120, 31.638956841735819 ]
},
"EndPoint": {
"type": "Point",
"coordinates": [ 75.929072617175663, 31.638879365370279 ]
} // if no angle
//"Angle": "317.0" // if no endpoint
}
]

7
FarmmapsNbs/Models/NitrogenInput.cs
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@ -5,6 +5,7 @@ namespace FarmmapsNbs.Models
{ {
public class NitrogenInput public class NitrogenInput
{ {
public bool UseCreatedCropfield { get; set; }
public string File { get; set; } public string File { get; set; }
public string InputVariable { get; set; } public string InputVariable { get; set; }
public string OutputFileName { get; set; } public string OutputFileName { get; set; }
@ -16,6 +17,12 @@ namespace FarmmapsNbs.Models
public string InputLayerName { get; set; } public string InputLayerName { get; set; }
public string fieldName{ get; set; } public string fieldName{ get; set; }
public bool storeSatelliteStatistics { get; set; } public bool storeSatelliteStatistics { get; set; }
public bool GenerateTaskmap { get; set; }
public string CellWidth { get; set; }
public string CellHeight { get; set; }
public JObject StartPoint { get; set; }
public JObject EndPoint { get; set; }
public string Angle { get; set; }
} }

22
FarmmapsNbs/NbsApplication.cs
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@ -37,7 +37,7 @@ namespace FarmmapsNbs
public async Task RunAsync() public async Task RunAsync()
{ {
var nitrogenInputJson = File.ReadAllText("NitrogenInput.json"); var nitrogenInputJson = File.ReadAllText("InputData-NBS.json"); //NitrogenInput.json
List<NitrogenInput> nitrogenInputs = JsonConvert.DeserializeObject<List<NitrogenInput>>(nitrogenInputJson); List<NitrogenInput> nitrogenInputs = JsonConvert.DeserializeObject<List<NitrogenInput>>(nitrogenInputJson);
if (!Directory.Exists(DownloadFolder)) if (!Directory.Exists(DownloadFolder))
@ -64,7 +64,7 @@ namespace FarmmapsNbs
{ {
// !!specify if you are using an already created cropfield: // !!specify if you are using an already created cropfield:
bool useCreatedCropfield = true; bool useCreatedCropfield = input. UseCreatedCropfield;
var plantingDate = input.PlantingDate; var plantingDate = input.PlantingDate;
var FieldName = input.fieldName; var FieldName = input.fieldName;
bool StoreStatistics = input.storeSatelliteStatistics; bool StoreStatistics = input.storeSatelliteStatistics;
@ -274,13 +274,25 @@ namespace FarmmapsNbs
_logger.LogError("Could not find item for uploaded data"); _logger.LogError("Could not find item for uploaded data");
return; return;
} }
_logger.LogInformation($"Converting geotiff to shape");
var taskmap = await _generalService.GeotiffToShape(tiffItem); //_logger.LogInformation($"Converting geotiff to shape");
if (taskmap == null) { //var taskmap = await _generalService.GeotiffToShape(tiffItem);
//if (taskmap == null) {
// _logger.LogError("Something went wrong with geotiff to shape transformation");
// return;
//}
//ApplicationMap (GEOTIFF) To Taskmap
_logger.LogInformation($"Converting geotiff to taskmap");
var taskmap = await _generalService.CreateTaskmap(cropfieldItem, tiffItem, input.CellWidth, input.CellHeight, input.StartPoint.ToString(Formatting.None),
input.EndPoint.ToString(Formatting.None), input.Angle);
if (taskmap == null)
{
_logger.LogError("Something went wrong with geotiff to shape transformation"); _logger.LogError("Something went wrong with geotiff to shape transformation");
return; return;
} }
_logger.LogInformation("Downloading taskmap"); _logger.LogInformation("Downloading taskmap");
await _farmmapsApiService.DownloadItemAsync(taskmap.Code, await _farmmapsApiService.DownloadItemAsync(taskmap.Code,
Path.Combine(DownloadFolder, $"{input.OutputFileName}.taskmap.zip")); Path.Combine(DownloadFolder, $"{input.OutputFileName}.taskmap.zip"));

BIN
FarmmapsZonering/Data/VRApoten_appliancemap_20210215_vraPoten_SampleData_CovertArea.tif Normal file
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Binary file not shown.

4
FarmmapsZonering/FarmmapsZonering.csproj
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@ -23,5 +23,9 @@
<ItemGroup> <ItemGroup>
<ProjectReference Include="..\FarmmapsApi\FarmmapsApi.csproj" /> <ProjectReference Include="..\FarmmapsApi\FarmmapsApi.csproj" />
</ItemGroup> </ItemGroup>
<ItemGroup>
<Folder Include="Data" />
</ItemGroup>
</Project> </Project>

12
FarmmapsZonering/Services/ZoneringService.cs
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@ -49,13 +49,11 @@ namespace FarmmapsZonering.Services
return null; return null;
} }
var itemName = $"VRAZonering"; var applianceMapItem = await _generalService.FindChildItemAsync(cropfieldItem.Code,
var applianceMapItem = await _generalService.FindChildItemAsync(cropfieldItem.Code, GEOTIFF_PROCESSED_ITEMTYPE, output.Name,
GEOTIFF_PROCESSED_ITEMTYPE, itemName, i => i.Updated >= itemTask.Finished.GetValueOrDefault(DateTime.UtcNow) &&
//i => i.Updated >= itemTask.Finished.GetValueOrDefault(DateTime.UtcNow) && i.Name.ToLower().Contains(output.Name.ToLower()));
// i.Name.ToLower().Contains(itemName.ToLower()));
i =>
i.Name.ToLower().Contains(itemName.ToLower()));
if (applianceMapItem == null) if (applianceMapItem == null)
{ {
_logger.LogError("Could not find the VRAZonering geotiff child item under cropfield"); _logger.LogError("Could not find the VRAZonering geotiff child item under cropfield");

43
FarmmapsZonering/ZoneringApplication.cs
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@ -73,7 +73,7 @@ namespace FarmmapsZonering
return; return;
} }
bool useCreatedCropfield = true; bool useCreatedCropfield = false;
bool GetWatBal = input.GetWatBal; bool GetWatBal = input.GetWatBal;
bool getVanDerSat = input.GetVanDerSat; bool getVanDerSat = input.GetVanDerSat;
bool StoreVanDerSatStatistics = input.storeVanDerSatStatistics; bool StoreVanDerSatStatistics = input.storeVanDerSatStatistics;
@ -91,7 +91,7 @@ namespace FarmmapsZonering
} }
Item cropfieldItem; Item cropfieldItem;
if (string.IsNullOrEmpty(_settings.CropfieldItemCode) || input.CreateNewCropfield == true) if (input.CreateNewCropfield == true) // || string.IsNullOrEmpty(_settings.CropfieldItemCode) ## CHECK IT!!
{ {
_logger.LogInformation("Creating cropfield"); _logger.LogInformation("Creating cropfield");
@ -103,8 +103,8 @@ namespace FarmmapsZonering
_settings.CropfieldItemCode = cropfieldItem.Code; _settings.CropfieldItemCode = cropfieldItem.Code;
SaveSettings(settingsfile); SaveSettings(settingsfile);
cropfieldItem = await _generalService.CreateCropfieldItemAsync(myDrive.Code, "Cropfield VRA Zonering", 2020, //cropfieldItem = await _generalService.CreateCropfieldItemAsync(myDrive.Code, "Cropfield VRA Zonering", 2020,
@"{ ""type"": ""Polygon"", ""coordinates"": [ [ [ 5.670991253771027, 52.796788997702613 ], [ 5.671526456638633, 52.797291618546666 ], [ 5.671275936147413, 52.797422436717852 ], [ 5.671959173850738, 52.798269302728798 ], [ 5.670649634919365, 52.798778791408822 ], [ 5.671503682048522, 52.799591206957416 ], [ 5.675159003761311, 52.798193567415474 ], [ 5.673029579585948, 52.796024727480535 ], [ 5.670991253771027, 52.796788997702613 ] ] ] }"); // @"{ ""type"": ""Polygon"", ""coordinates"": [ [ [ 5.670991253771027, 52.796788997702613 ], [ 5.671526456638633, 52.797291618546666 ], [ 5.671275936147413, 52.797422436717852 ], [ 5.671959173850738, 52.798269302728798 ], [ 5.670649634919365, 52.798778791408822 ], [ 5.671503682048522, 52.799591206957416 ], [ 5.675159003761311, 52.798193567415474 ], [ 5.673029579585948, 52.796024727480535 ], [ 5.670991253771027, 52.796788997702613 ] ] ] }");
_settings.CropfieldItemCode = cropfieldItem.Code; _settings.CropfieldItemCode = cropfieldItem.Code;
SaveSettings(settingsfile); SaveSettings(settingsfile);
} }
@ -147,19 +147,24 @@ namespace FarmmapsZonering
var inputOneItem = await _generalService.UploadDataAsync(uploadedRoot, GEOTIFF_PROCESSED_ITEMTYPE, var inputOneItem = await _generalService.UploadDataAsync(uploadedRoot, GEOTIFF_PROCESSED_ITEMTYPE,
Path.Combine("Data", $"{input.InputItemOne}"), Path.GetFileNameWithoutExtension($"{input.InputItemOne}")); Path.Combine("Data", $"{input.InputItemOne}"), Path.GetFileNameWithoutExtension($"{input.InputItemOne}"));
if (inputOneItem == null) { if (inputOneItem == null)
{
_logger.LogError("Could not find item for uploaded data"); _logger.LogError("Could not find item for uploaded data");
return; return;
} }
var inputTwoItem = await _generalService.UploadDataAsync(uploadedRoot, GEOTIFF_PROCESSED_ITEMTYPE,
Path.Combine("Data", $"{input.InputItemTwo}"), Path.GetFileNameWithoutExtension($"{input.InputItemTwo}"));
if (inputTwoItem == null) { //var inputTwoItem = await _generalService.UploadDataAsync(uploadedRoot, GEOTIFF_PROCESSED_ITEMTYPE,
_logger.LogError("Could not find item for uploaded data"); // Path.Combine("Data", $"{input.InputItemTwo}"), Path.GetFileNameWithoutExtension($"{input.InputItemTwo}"));
return;
} //if (inputTwoItem == null)
//{
// _logger.LogError("Could not find item for uploaded data");
// return;
//}
//var inputOneItem = input.InputItemOne;
//var inputTwoItem = input.InputItemTwo;
var outputItem = await _zoneringService.CreateApplicationMapAsync(cropfieldItem, input.Formula, new Output() var outputItem = await _zoneringService.CreateApplicationMapAsync(cropfieldItem, input.Formula, new Output()
{ {
@ -172,12 +177,14 @@ namespace FarmmapsZonering
{ {
ItemCode = inputOneItem.Code, ItemCode = inputOneItem.Code,
LayerName = inputOneItem.Data["layers"][0]["name"].ToString() LayerName = inputOneItem.Data["layers"][0]["name"].ToString()
}, }
new InputParameter() //,
{ //new InputParameter()
ItemCode = inputOneItem.Code, //{
LayerName = inputOneItem.Data["layers"][0]["name"].ToString() // //ItemCode = inputOneItem.Code,
}); // //LayerName = inputOneItem.Data["layers"][0]["name"].ToString()
//}
);;
_logger.LogInformation("Downloading output"); _logger.LogInformation("Downloading output");

152
FarmmapsZonering/ZoneringInput.json
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@ -1,71 +1,101 @@
[ [
//Formule kan meerdere inputs aan //Formule kan meerdere inputs aan
// Met blokhaken en een nummer specificeer je een input: // Met blokhaken en een nummer specificeer je een input:
//[0], [10]. etc... //[0], [10]. etc...
// Aan de hand van de volgorde van input wordt momenteel bepaald welk nummer bij welk input hoort. // Aan de hand van de volgorde van input wordt momenteel bepaald welk nummer bij welk input hoort.
//[0] is dus de eerst tiff opgegeven.Als het goed is maakt het nummer nu niks uit, dus als er 2 inputs zijn en in de formule staan[0] en[10] dan zal die nog steeds werken. //[0] is dus de eerst tiff opgegeven.Als het goed is maakt het nummer nu niks uit, dus als er 2 inputs zijn en in de formule staan[0] en[10] dan zal die nog steeds werken.
//De volgorde van de tiff kun je verslepen, bij de formule inputs kun je de input van het ene[0] slot naar het andere slepen[10] //De volgorde van de tiff kun je verslepen, bij de formule inputs kun je de input van het ene[0] slot naar het andere slepen[10]
//Functies: abs, min en max //Functies: abs, min en max
//Constanten: pi en e //Constanten: pi en e
//if ([0] -[1])/ ([0] +[1]) < 0 then 0 //if ([0] -[1])/ ([0] +[1]) < 0 then 0
//else if ([0] -[1])/ ([0] +[1]) > 1 then 1 //else if ([0] -[1])/ ([0] +[1]) > 1 then 1
//else ([0] -[1]) / ([0] +[1]) //else ([0] -[1]) / ([0] +[1])
//{ //{
// "InputItemOne": "20201106_Sentinel2_L2A_B04.tiff", // "InputItemOne": "20201106_Sentinel2_L2A_B04.tiff",
// "InputItemTwo": "20201106_Sentinel2_L2A_B08.tiff", // "InputItemTwo": "20201106_Sentinel2_L2A_B08.tiff",
// "Formula": "([1]-[0])/([1]+[0])", // "Formula": "([1]-[0])/([1]+[0])",
// "CreatedLayerName": "Biomassa", // "CreatedLayerName": "Biomassa",
// "CalculatedQuantity": "NDVI", // "CalculatedQuantity": "NDVI",
// "CalculatedUnit": "ndviValue", // "CalculatedUnit": "ndviValue",
// "OutputFileName": "FullField_NDVI", // "OutputFileName": "FullField_NDVI",
// "CropFieldName": "FullField", // "CropFieldName": "FullField",
// "CreateNewCropfield": false, // "CreateNewCropfield": false,
// "CropYear": 2020, // "CropYear": 2020,
// "geometryJson": { // "geometryJson": {
// "type": "Polygon", // "type": "Polygon",
// "coordinates": [ // "coordinates": [
// [ // [
// [ 4.9593709, 52.8014339 ], // [ 4.9593709, 52.8014339 ],
// [ 4.9675488, 52.7943149 ], // [ 4.9675488, 52.7943149 ],
// [ 4.9735195, 52.7968665 ], // [ 4.9735195, 52.7968665 ],
// [ 4.9667833, 52.8030414 ], // [ 4.9667833, 52.8030414 ],
// [ 4.9593709, 52.8014339 ] // [ 4.9593709, 52.8014339 ]
// ] // ]
// ] // ]
// }, // }
{ //,
"InputItemOne": "data_9001.tif", //{
"InputItemTwo": "data_times_two_4326.tiff", // "InputItemOne": "data_9001.tif",
"Formula": "if [0] >= 1.28 then [1] else 0", // "InputItemTwo": "data_times_two_4326.tiff",
"CreatedLayerName": "Biomassa", // "Formula": "if [0] >= 1.28 then [1] else 0",
"CalculatedQuantity": "NDVI", // "CreatedLayerName": "Biomassa",
"CalculatedUnit": "ndviValue", // "CalculatedQuantity": "NDVI",
"OutputFileName": "Zoning", // "CalculatedUnit": "ndviValue",
"CropFieldName": "Data_whole", // "OutputFileName": "Zoning",
"UseShadow": false, // "CropFieldName": "Data_whole",
"GetWatBal": false, // "UseShadow": false,
"GetVanDerSat": true, // "GetWatBal": false,
"storeVanDerSatStatistics": true, // "GetVanDerSat": false,
"CropYear": 2020, // "storeVanDerSatStatistics": false,
"geometryJson": { // "CropYear": 2020,
"type": "Polygon", // "geometryJson": {
"coordinates": [ // "type": "Polygon",
[ // "coordinates": [
[ 5.66886041703652044, 52.52929999060298627 ], // [
[ 5.6716230923214912, 52.52946316399909676 ], // [ 5.66886041703652044, 52.52929999060298627 ],
[ 5.67185376229668581, 52.5280565894154563 ], // [ 5.6716230923214912, 52.52946316399909676 ],
[ 5.66903207841337231, 52.52790646510525363 ], // [ 5.67185376229668581, 52.5280565894154563 ],
[ 5.66886041703652044, 52.52929999060298627 ] // [ 5.66903207841337231, 52.52790646510525363 ],
] // [ 5.66886041703652044, 52.52929999060298627 ]
] // ]
// ]
// }
//},
{
"InputItemOne": "VRApoten_appliancemap_20210215_vraPoten_SampleData_CovertArea.tif",
//"InputItemTwo": "",
"Formula": "((100/[0])/0.75)",
"LayerName": "CountPerAreaConversion",
"CalculatedQuantity": "CountPerArea",
"CalculatedUnit": "#/m2",
"OutputFileName": "CountPerAreaConversionOutput",
"CropFieldName": "ZoningCpA",
"CreateNewCropfield": true,
"UseShadow": false,
"GetWatBal": false,
"GetVanDerSat": false,
"storeVanDerSatStatistics": false,
"CropYear": 2020,
"geometryJson": {
"type": "Polygon",
"coordinates": [
[
[ 5.66886041703652044, 52.52929999060298627 ],
[ 5.6716230923214912, 52.52946316399909676 ],
[ 5.67185376229668581, 52.5280565894154563 ],
[ 5.66903207841337231, 52.52790646510525363 ],
[ 5.66886041703652044, 52.52929999060298627 ]
]
]
}
} }
}
] ]