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11 changed files with 132 additions and 238 deletions

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@ -1,20 +1,17 @@

Microsoft Visual Studio Solution File, Format Version 12.00
#
Project("{FAE04EC0-301F-11D3-BF4B-00C04F79EFBC}") = "FarmmapsNbs", "FarmmapsNbs\FarmmapsNbs.csproj", "{E08EF7E9-F09E-42D8-825C-164E458C78F4}"
EndProject
Project("{FAE04EC0-301F-11D3-BF4B-00C04F79EFBC}") = "FarmmapsApi", "FarmmapsApi\FarmmapsApi.csproj", "{1FA9E50B-F45E-4534-953A-37C783D03C74}"
EndProject
Project("{2150E333-8FDC-42A3-9474-1A3956D46DE8}") = "General", "General", "{6FA66E07-A59E-480E-B5D1-DBEFC4E4583D}"
ProjectSection(SolutionItems) = preProject
ProjectSection(SolutionItems) = preProject
README.MD = README.MD
.gitignore = .gitignore
EndProjectSection
EndProjectSection
EndProject
Project("{FAE04EC0-301F-11D3-BF4B-00C04F79EFBC}") = "FarmmapsHerbicide", "FarmmapsHerbicide\FarmmapsHerbicide.csproj", "{731A88CD-9DC4-4969-86F2-2315830A6998}"
EndProject
Project("{FAE04EC0-301F-11D3-BF4B-00C04F79EFBC}") = "FarmmapsHaulmkilling", "FarmmapsHaulmkilling\FarmmapsHaulmkilling.csproj", "{DFA89D0B-5400-4374-B824-8367B76B4B6E}"
EndProject
Global
GlobalSection(SolutionConfigurationPlatforms) = preSolution
Debug|Any CPU = Debug|Any CPU
@ -33,9 +30,5 @@ Global
{731A88CD-9DC4-4969-86F2-2315830A6998}.Debug|Any CPU.Build.0 = Debug|Any CPU
{731A88CD-9DC4-4969-86F2-2315830A6998}.Release|Any CPU.ActiveCfg = Release|Any CPU
{731A88CD-9DC4-4969-86F2-2315830A6998}.Release|Any CPU.Build.0 = Release|Any CPU
{DFA89D0B-5400-4374-B824-8367B76B4B6E}.Debug|Any CPU.ActiveCfg = Debug|Any CPU
{DFA89D0B-5400-4374-B824-8367B76B4B6E}.Debug|Any CPU.Build.0 = Debug|Any CPU
{DFA89D0B-5400-4374-B824-8367B76B4B6E}.Release|Any CPU.ActiveCfg = Release|Any CPU
{DFA89D0B-5400-4374-B824-8367B76B4B6E}.Release|Any CPU.Build.0 = Release|Any CPU
EndGlobalSection
EndGlobal

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@ -1,20 +0,0 @@
<Project Sdk="Microsoft.NET.Sdk">
<PropertyGroup>
<OutputType>Exe</OutputType>
<TargetFramework>netcoreapp3.0</TargetFramework>
</PropertyGroup>
<ItemGroup>
<None Update="appsettings.json">
<CopyToOutputDirectory>Always</CopyToOutputDirectory>
</None>
<None Update="Data\**\*">
<CopyToOutputDirectory>Always</CopyToOutputDirectory>
</None>
</ItemGroup>
<ItemGroup>
<ProjectReference Include="..\FarmmapsApi\FarmmapsApi.csproj" />
</ItemGroup>
</Project>

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@ -1,69 +0,0 @@
using System.IO;
using System.Linq;
using System.Threading.Tasks;
using FarmmapsApi;
using FarmmapsApi.Services;
using Microsoft.Extensions.Logging;
namespace FarmmapsHaulmkilling
{
public class HaulmkillingApplication : IApplication
{
private const string DownloadFolder = "Downloads";
private readonly ILogger<HaulmkillingApplication> _logger;
private readonly FarmmapsApiService _farmmapsApiService;
private readonly HaulmkillingService _haulmkillingService;
private readonly GeneralService _generalService;
public HaulmkillingApplication(ILogger<HaulmkillingApplication> logger, FarmmapsApiService farmmapsApiService,
GeneralService generalService, HaulmkillingService haulmkillingService)
{
_logger = logger;
_farmmapsApiService = farmmapsApiService;
_generalService = generalService;
_haulmkillingService = haulmkillingService;
}
public async Task RunAsync()
{
if (!Directory.Exists(DownloadFolder))
Directory.CreateDirectory(DownloadFolder);
// !! this call is needed the first time an api is called with a fresh clientid and secret !!
await _farmmapsApiService.GetCurrentUserCodeAsync();
var roots = await _farmmapsApiService.GetCurrentUserRootsAsync();
var myDrive = roots.SingleOrDefault(r => r.Name == "My drive");
if (myDrive == null)
{
_logger.LogError("Could not find a needed root item");
return;
}
var uploadedRoot = roots.SingleOrDefault(r => r.Name == "Uploaded");
if (uploadedRoot == null)
{
_logger.LogError("Could not find a needed root item");
return;
}
var agents = await _haulmkillingService.GetHaulmkillingAgents();
if (agents == null)
{
_logger.LogError("No valid agents found for haulmkilling");
return;
}
// save cropfield item and check if already exists and created (this to not have to run satellite everytime)
_logger.LogInformation("Creating cropfield");
var cropfieldItem = await _generalService.CreateCropfieldItemAsync(myDrive.Code, "Cropfield VRA Haulmkilling", 2020,
@"{""type"":""Polygon"",""coordinates"":[[[4.617786844284247,52.22533706956424],[4.618642601314543,52.225938364585989],[4.6192153806397,52.22563988897754],[4.619192414656403,52.2256242822442],[4.620306732153958,52.225031745661528],[4.620542019225217,52.22519855319158],[4.621157509147853,52.22487436515405],[4.623387917230182,52.22367660757213],[4.624563444939009,52.22304740241544],[4.624562779355982,52.223046635247019],[4.624534908813479,52.22302596787506],[4.627873021330343,52.221240670658399],[4.627504935938338,52.220104419135129],[4.627324878706837,52.22020569669098],[4.627320696113512,52.22020660117888],[4.626707169518044,52.22053923770041],[4.624700376420229,52.221619047547488],[4.623471571183885,52.22227447969577],[4.623471511010673,52.22227500174403],[4.623468838689317,52.22228052566992],[4.617786844284247,52.22533706956424]]]}");
// run satellite task on just added cropfield
// find ndvi or wdvi satellite data geotiffs
}
}
}

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@ -1,36 +0,0 @@
using System.Collections.Generic;
using System.Linq;
using System.Threading.Tasks;
using FarmmapsApi.Services;
using FarmmapsHaulmkilling.Models;
using Microsoft.Extensions.Logging;
namespace FarmmapsHaulmkilling
{
public class HaulmkillingService
{
private readonly ILogger<HaulmkillingService> _logger;
private readonly FarmmapsApiService _farmmapsApiService;
private readonly GeneralService _generalService;
public HaulmkillingService(ILogger<HaulmkillingService> logger, FarmmapsApiService farmmapsApiService,
GeneralService generalService)
{
_logger = logger;
_farmmapsApiService = farmmapsApiService;
_generalService = generalService;
}
public async Task<List<HaulmkillingAgent>> GetHaulmkillingAgents()
{
var itemType = "vnd.farmmaps.package.vra.haulmkilling";
var vraHerbicideDataItems = await _farmmapsApiService.GetItemsAsync(string.Empty, itemType);
var item = vraHerbicideDataItems.FirstOrDefault();
if (item == null)
return null;
return item.Data.ContainsKey("agents") ? item.Data["agents"].ToObject<List<HaulmkillingAgent>>() : null;
}
}
}

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@ -1,30 +0,0 @@
using System.Collections.Generic;
using System.Linq;
namespace FarmmapsHaulmkilling.Models
{
public class HaulmkillingAgent
{
public string Name { get; set; }
public List<string> SupportedOptions { get; set; }
public Dictionary<string, List<HaulmkillingAgentValue>> Values { get; set; }
public HaulmkillingAgentValue? GetAgentValue(string inputName, string optionKey)
{
if (!Values.ContainsKey(inputName))
return null;
var agentDataValues = Values[inputName];
return agentDataValues.FirstOrDefault(v => v.Option.Equals(optionKey));
}
}
public struct HaulmkillingAgentValue
{
public string Option { get; set; }
public float Min { get; set; }
public float Max { get; set; }
public float FMul { get; set; }
public float FExp { get; set; }
}
}

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@ -1,23 +0,0 @@
using System.Threading.Tasks;
using FarmmapsApi;
using Microsoft.Extensions.DependencyInjection;
using Microsoft.Extensions.Logging;
namespace FarmmapsHaulmkilling
{
class Program : FarmmapsProgram<HaulmkillingApplication>
{
private static async Task Main(string[] args)
{
await new Program().Start(args);
}
protected override void Configure(IServiceCollection serviceCollection)
{
serviceCollection.AddLogging(opts => opts
.AddConsole()
.AddFilter("System.Net.Http", LogLevel.Warning))
.AddTransient<HaulmkillingService>();
}
}
}

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@ -1,10 +0,0 @@
{
"Authority": "https://accounts.farmmaps.awtest.nl/",
"Endpoint": "http://farmmaps.awtest.nl",
"BasePath": "api/v1",
"DiscoveryEndpointUrl": "https://accounts.farmmaps.awtest.nl/.well-known/openid-configuration",
"RedirectUri": "http://example.nl/api",
"ClientId": "",
"ClientSecret": "",
"Scopes": ["api"]
}

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@ -5,7 +5,8 @@ namespace FarmmapsNbs.Models
{
public class NitrogenInput
{
public string IsariaZipFile { get; set; }
public string ZippedShapeFile { get; set; }
public string InputVariable { get; set; }
public string OutputFileName { get; set; }
public DateTime PlantingDate { get; set; }
public DateTime MeasurementDate { get; set; }

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@ -77,20 +77,20 @@ namespace FarmmapsNbs
var cropfieldItem = await _generalService.CreateCropfieldItemAsync(myDriveRoot.Code,
$"VRA NBS cropfield {input.OutputFileName}", plantingDate.Year, input.GeometryJson.ToString(Formatting.None));
var dataPath = Path.Combine("Data", input.IsariaZipFile);
var isariaShapeItem =
await _generalService.UploadZipWithShapeAsync(uploadedRoot, dataPath, Path.GetFileNameWithoutExtension(input.IsariaZipFile));
if (isariaShapeItem == null)
var dataPath = Path.Combine("Data", input.ZippedShapeFile);
var shapeItem =
await _generalService.UploadZipWithShapeAsync(uploadedRoot, dataPath, Path.GetFileNameWithoutExtension(input.ZippedShapeFile));
if (shapeItem == null)
{
_logger.LogError("Could not find isaria shape item");
_logger.LogError("Could not find shape item");
return;
}
_logger.LogInformation($"Converting shape to geotiff");
var isariaGeotiffItem = await _generalService.ShapeToGeotiff(isariaShapeItem);
if (isariaGeotiffItem == null)
var geotiffItem = await _generalService.ShapeToGeotiff(shapeItem);
if (geotiffItem == null)
{
_logger.LogError("Something went wrong with isaria shape to geotiff transformation");
_logger.LogError("Something went wrong with shape to geotiff transformation");
return;
}
@ -112,21 +112,21 @@ namespace FarmmapsNbs
_logger.LogInformation("Calculating uptake map");
var uptakeMapItem =
await _nitrogenService.CalculateUptakeMap(cropfieldItem, isariaGeotiffItem, plantingDate,
measurementDate);
await _nitrogenService.CalculateUptakeMap(cropfieldItem, geotiffItem, plantingDate,
measurementDate, input.InputVariable);
_logger.LogInformation("Downloading uptake map");
await _farmmapsApiService.DownloadItemAsync(uptakeMapItem.Code,
Path.Combine(DownloadFolder, $"{input.OutputFileName}.uptake.zip"));
_logger.LogInformation("Calculating appliance map");
var applianceMapItem =
await _nitrogenService.CalculateApplicationMap(cropfieldItem, isariaGeotiffItem, plantingDate,
_logger.LogInformation("Calculating application map");
var applicationMapItem =
await _nitrogenService.CalculateApplicationMap(cropfieldItem, geotiffItem, plantingDate,
measurementDate,
"irmi", targetNData.TargetN);
input.InputVariable, targetNData.TargetN);
_logger.LogInformation("Downloading appliance map");
await _farmmapsApiService.DownloadItemAsync(applianceMapItem.Code,
_logger.LogInformation("Downloading application map");
await _farmmapsApiService.DownloadItemAsync(applicationMapItem.Code,
Path.Combine(DownloadFolder, $"{input.OutputFileName}.application.zip"));
}
}

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@ -1,6 +1,7 @@
[
{
"isariaZipFile": "Scan_1_20190605.zip",
"zippedShapeFile": "Scan_1_20190605.zip",
"inputVariable": "irmi",
"outputFileName": "vranbs1",
"plantingDate": "2019-04-18",
"measurementDate": "2019-06-05",
@ -9,30 +10,117 @@
"geometryJson": { "type": "Polygon", "coordinates": [ [ [ 3.40843828875524, 50.638966444680605 ], [ 3.408953272886064, 50.639197789621612 ], [ 3.409242951459603, 50.639469958681836 ], [ 3.409328782148028, 50.639612846807708 ], [ 3.409457528180712, 50.639789755314411 ], [ 3.409639918393741, 50.640014292074966 ], [ 3.409833037442765, 50.640211611372706 ], [ 3.410069071836049, 50.640395321698435 ], [ 3.410380208081761, 50.640572227259661 ], [ 3.410605513638958, 50.640715112034222 ], [ 3.411925160474145, 50.641177783561204 ], [ 3.411935889310142, 50.640728720085136 ], [ 3.412590348309737, 50.63948356709389 ], [ 3.413244807309242, 50.638224772339846 ], [ 3.413400375432099, 50.637901562841307 ], [ 3.413539850300779, 50.637449065809889 ], [ 3.413475477284437, 50.637418445552932 ], [ 3.40999396998362, 50.637449065810451 ], [ 3.409940325803365, 50.638102293212661 ], [ 3.409575545377398, 50.638483338338325 ], [ 3.409060561246574, 50.638707881340494 ], [ 3.40843828875524, 50.638966444680605 ] ] ] }
},
{
"isariaZipFile": "Scan_1_20190605.zip",
"zippedShapeFile": "Scan_1_20190605.zip",
"inputVariable": "irmi",
"outputFileName": "vranbs2",
"plantingDate": "2019-04-18",
"measurementDate": "2019-06-05",
"potatoPurposeType": "starch",
"targetYield": 45,
"geometryJson": { "type": "Polygon", "coordinates": [ [ [ 3.40843828875524, 50.638966444680605 ], [ 3.408953272886064, 50.639197789621612 ], [ 3.409242951459603, 50.639469958681836 ], [ 3.409328782148028, 50.639612846807708 ], [ 3.409457528180712, 50.639789755314411 ], [ 3.409639918393741, 50.640014292074966 ], [ 3.409833037442765, 50.640211611372706 ], [ 3.410069071836049, 50.640395321698435 ], [ 3.410380208081761, 50.640572227259661 ], [ 3.410605513638958, 50.640715112034222 ], [ 3.411925160474145, 50.641177783561204 ], [ 3.411935889310142, 50.640728720085136 ], [ 3.412590348309737, 50.63948356709389 ], [ 3.413244807309242, 50.638224772339846 ], [ 3.413400375432099, 50.637901562841307 ], [ 3.413539850300779, 50.637449065809889 ], [ 3.413475477284437, 50.637418445552932 ], [ 3.40999396998362, 50.637449065810451 ], [ 3.409940325803365, 50.638102293212661 ], [ 3.409575545377398, 50.638483338338325 ], [ 3.409060561246574, 50.638707881340494 ], [ 3.40843828875524, 50.638966444680605 ] ] ] }
"geometryJson": {
"type": "Polygon",
"coordinates": [
[
[ 3.40843828875524, 50.638966444680605 ],
[ 3.408953272886064, 50.639197789621612 ],
[ 3.409242951459603, 50.639469958681836 ],
[ 3.409328782148028, 50.639612846807708 ],
[ 3.409457528180712, 50.639789755314411 ],
[ 3.409639918393741, 50.640014292074966 ],
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[ 3.410069071836049, 50.640395321698435 ],
[ 3.410380208081761, 50.640572227259661 ],
[ 3.410605513638958, 50.640715112034222 ],
[ 3.411925160474145, 50.641177783561204 ],
[ 3.411935889310142, 50.640728720085136 ],
[ 3.412590348309737, 50.63948356709389 ],
[ 3.413244807309242, 50.638224772339846 ],
[ 3.413400375432099, 50.637901562841307 ],
[ 3.413539850300779, 50.637449065809889 ],
[ 3.413475477284437, 50.637418445552932 ],
[ 3.40999396998362, 50.637449065810451 ],
[ 3.409940325803365, 50.638102293212661 ],
[ 3.409575545377398, 50.638483338338325 ],
[ 3.409060561246574, 50.638707881340494 ],
[ 3.40843828875524, 50.638966444680605 ]
]
]
}
},
{
"isariaZipFile": "Scan_1_20190605.zip",
"zippedShapeFile": "Scan_1_20190605.zip",
"inputVariable": "irmi",
"outputFileName": "vranbs3",
"plantingDate": "2019-04-18",
"measurementDate": "2019-06-20",
"potatoPurposeType": "starch",
"targetYield": 45,
"geometryJson": { "type": "Polygon", "coordinates": [ [ [ 3.40843828875524, 50.638966444680605 ], [ 3.408953272886064, 50.639197789621612 ], [ 3.409242951459603, 50.639469958681836 ], [ 3.409328782148028, 50.639612846807708 ], [ 3.409457528180712, 50.639789755314411 ], [ 3.409639918393741, 50.640014292074966 ], [ 3.409833037442765, 50.640211611372706 ], [ 3.410069071836049, 50.640395321698435 ], [ 3.410380208081761, 50.640572227259661 ], [ 3.410605513638958, 50.640715112034222 ], [ 3.411925160474145, 50.641177783561204 ], [ 3.411935889310142, 50.640728720085136 ], [ 3.412590348309737, 50.63948356709389 ], [ 3.413244807309242, 50.638224772339846 ], [ 3.413400375432099, 50.637901562841307 ], [ 3.413539850300779, 50.637449065809889 ], [ 3.413475477284437, 50.637418445552932 ], [ 3.40999396998362, 50.637449065810451 ], [ 3.409940325803365, 50.638102293212661 ], [ 3.409575545377398, 50.638483338338325 ], [ 3.409060561246574, 50.638707881340494 ], [ 3.40843828875524, 50.638966444680605 ] ] ] }
"geometryJson": {
"type": "Polygon",
"coordinates": [
[
[ 3.40843828875524, 50.638966444680605 ],
[ 3.408953272886064, 50.639197789621612 ],
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[ 3.40843828875524, 50.638966444680605 ]
]
]
}
},
{
"isariaZipFile": "Scan_1_20190605.zip",
"zippedShapeFile": "Scan_1_20190605.zip",
"inputVariable": "irmi",
"outputFileName": "vranbs4",
"plantingDate": "2019-04-18",
"measurementDate": "2019-07-03",
"potatoPurposeType": "starch",
"targetYield": 45,
"geometryJson": { "type": "Polygon", "coordinates": [ [ [ 3.40843828875524, 50.638966444680605 ], [ 3.408953272886064, 50.639197789621612 ], [ 3.409242951459603, 50.639469958681836 ], [ 3.409328782148028, 50.639612846807708 ], [ 3.409457528180712, 50.639789755314411 ], [ 3.409639918393741, 50.640014292074966 ], [ 3.409833037442765, 50.640211611372706 ], [ 3.410069071836049, 50.640395321698435 ], [ 3.410380208081761, 50.640572227259661 ], [ 3.410605513638958, 50.640715112034222 ], [ 3.411925160474145, 50.641177783561204 ], [ 3.411935889310142, 50.640728720085136 ], [ 3.412590348309737, 50.63948356709389 ], [ 3.413244807309242, 50.638224772339846 ], [ 3.413400375432099, 50.637901562841307 ], [ 3.413539850300779, 50.637449065809889 ], [ 3.413475477284437, 50.637418445552932 ], [ 3.40999396998362, 50.637449065810451 ], [ 3.409940325803365, 50.638102293212661 ], [ 3.409575545377398, 50.638483338338325 ], [ 3.409060561246574, 50.638707881340494 ], [ 3.40843828875524, 50.638966444680605 ] ] ] }
"geometryJson": {
"type": "Polygon",
"coordinates": [
[
[ 3.40843828875524, 50.638966444680605 ],
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[ 3.412590348309737, 50.63948356709389 ],
[ 3.413244807309242, 50.638224772339846 ],
[ 3.413400375432099, 50.637901562841307 ],
[ 3.413539850300779, 50.637449065809889 ],
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[ 3.409575545377398, 50.638483338338325 ],
[ 3.409060561246574, 50.638707881340494 ],
[ 3.40843828875524, 50.638966444680605 ]
]
]
}
}
]

View File

@ -84,7 +84,7 @@ namespace FarmmapsNbs
/// <param name="measurementDate">The date the measurements are taken</param>
/// <returns></returns>
public async Task<Item> CalculateUptakeMap(Item cropfieldItem, Item inputItem, DateTime plantingDate,
DateTime measurementDate, string inputType = "irmi")
DateTime measurementDate, string inputType)
{
var nbsUptakeMapRequest = new TaskRequest {TaskType = VRANBS_TASK};
nbsUptakeMapRequest.attributes["operation"] = "uptake";
@ -125,7 +125,7 @@ namespace FarmmapsNbs
/// <summary>
/// Creates the nitrogen appliance map based on given input data
/// Creates the nitrogen application map based on given input data
/// </summary>
/// <param name="cropfieldItem">The cropfield to base the calculations on</param>
/// <param name="inputItem">The farmmaps item containing the geotiff data</param>
@ -135,18 +135,18 @@ namespace FarmmapsNbs
/// <param name="targetN">The target nitrogen to use for the calculations</param>
/// <returns></returns>
public async Task<Item> CalculateApplicationMap(Item cropfieldItem, Item inputItem, DateTime plantingDate,
DateTime measurementDate, string inputType = "irmi", double targetN = 60.0)
DateTime measurementDate, string inputType, double targetN)
{
var nbsApplianceMapRequest = new TaskRequest {TaskType = VRANBS_TASK};
nbsApplianceMapRequest.attributes["operation"] = "application";
nbsApplianceMapRequest.attributes["inputCode"] = inputItem.Code;
nbsApplianceMapRequest.attributes["plantingDate"] = plantingDate.ToString();
nbsApplianceMapRequest.attributes["measurementDate"] = measurementDate.ToString();
nbsApplianceMapRequest.attributes["inputCode"] = inputItem.Code;
nbsApplianceMapRequest.attributes["inputType"] = inputType.ToLower();
nbsApplianceMapRequest.attributes["targetN"] = targetN.ToString(CultureInfo.InvariantCulture);
var nbsApplicationMapRequest = new TaskRequest {TaskType = VRANBS_TASK};
nbsApplicationMapRequest.attributes["operation"] = "application";
nbsApplicationMapRequest.attributes["inputCode"] = inputItem.Code;
nbsApplicationMapRequest.attributes["plantingDate"] = plantingDate.ToString();
nbsApplicationMapRequest.attributes["measurementDate"] = measurementDate.ToString();
nbsApplicationMapRequest.attributes["inputCode"] = inputItem.Code;
nbsApplicationMapRequest.attributes["inputType"] = inputType.ToLower();
nbsApplicationMapRequest.attributes["targetN"] = targetN.ToString(CultureInfo.InvariantCulture);
string itemTaskCode = await _farmmapsApiService.QueueTaskAsync(cropfieldItem.Code, nbsApplianceMapRequest);
string itemTaskCode = await _farmmapsApiService.QueueTaskAsync(cropfieldItem.Code, nbsApplicationMapRequest);
await PollTask(TimeSpan.FromSeconds(5), async (tokenSource) =>
{
@ -163,17 +163,17 @@ namespace FarmmapsNbs
}
var itemName = $"VRANbs application";
var applianceMapItem = await _generalService.FindChildItemAsync(cropfieldItem.Code,
var applicationMapItem = await _generalService.FindChildItemAsync(cropfieldItem.Code,
GEOTIFF_PROCESSED_ITEMTYPE, itemName,
i => i.Updated >= itemTask.Finished.GetValueOrDefault(DateTime.UtcNow) &&
i.Name.ToLower().Contains(itemName.ToLower()));
if (applianceMapItem == null)
if (applicationMapItem == null)
{
_logger.LogError("Could not find the application map geotiff child item under cropfield");
return null;
}
return applianceMapItem;
return applicationMapItem;
}
}
}